Difference between revisions of "FSU RS06065"

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(Created page with "Category:reaction == Reaction RXN-9929 == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1] * direction: ** left-to-right * common-name: ** dihydroorotate...")
(Created page with "Category:reaction == Reaction RXN-14315 == * direction: ** left-to-right == Reaction formula == * 1 COBALT-FACTOR-III[c] '''+''' 1 Donor-H2[c] '''=>''' 1 Accepto...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-9929 ==
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== Reaction RXN-14315 ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/1.3.98.1 ec-1.3.98.1]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** dihydroorotate oxidase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[FUM]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[COBALT-FACTOR-III]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[CPD-9040]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS02415]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FISUC_RS00540]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7790]], UMP biosynthesis II:
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
** '''6''' reactions found over '''6''' reactions in the full pathway
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** '''15''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach cpd-691
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30062 30062]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P74782 P74782]
 
** [http://www.uniprot.org/uniprot/Q63707 Q63707]
 
** [http://www.uniprot.org/uniprot/Q48240 Q48240]
 
** [http://www.uniprot.org/uniprot/P32746 P32746]
 
** [http://www.uniprot.org/uniprot/Q02127 Q02127]
 
** [http://www.uniprot.org/uniprot/P32748 P32748]
 
** [http://www.uniprot.org/uniprot/P28294 P28294]
 
** [http://www.uniprot.org/uniprot/P28272 P28272]
 
** [http://www.uniprot.org/uniprot/P46539 P46539]
 
** [http://www.uniprot.org/uniprot/Q9CFC9 Q9CFC9]
 
** [http://www.uniprot.org/uniprot/P25996 P25996]
 
** [http://www.uniprot.org/uniprot/Q58070 Q58070]
 
** [http://www.uniprot.org/uniprot/P0A7E1 P0A7E1]
 
** [http://www.uniprot.org/uniprot/Q9JX66 Q9JX66]
 
** [http://www.uniprot.org/uniprot/Q9PPB6 Q9PPB6]
 
** [http://www.uniprot.org/uniprot/Q9CFW8 Q9CFW8]
 
** [http://www.uniprot.org/uniprot/P45477 P45477]
 
** [http://www.uniprot.org/uniprot/P32747 P32747]
 
** [http://www.uniprot.org/uniprot/P07670 P07670]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01867 R01867]
 
</div>
 
{{#set: ec-number=ec-1.3.98.1}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=dihydroorotate oxidase}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools|orthofinder}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to reach cpd-691}}
{{#set: reconstruction source=genome|bthetaiotaomicron}}
+
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}

Revision as of 19:40, 13 January 2021

Reaction RXN-14315

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 15 reactions found over 15 reactions in the full pathway

Reconstruction information

External links