Difference between revisions of "ORNDECARBOX-RXN"

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(Created page with "Category:reaction == Reaction RXN0-724 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.98.6 ec-1.1.98.6] * direction: ** left-to-right * common-name: ** anaerobic ribo...")
(Created page with "Category:reaction == Reaction RXN-13158 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85] * direction: ** left-to-right * common-name: ** 3-isopropylma...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-724 ==
+
== Reaction RXN-13158 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.98.6 ec-1.1.98.6]
+
** [http://enzyme.expasy.org/EC/1.1.1.85 ec-1.1.1.85]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** anaerobic ribonucleoside-triphosphate reductase
+
** 3-isopropylmalate dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UTP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DUTP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS02335]]
+
* Gene: [[FSU_RS15260]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[FISUC_RS10855]]
+
* Gene: [[FISUC_RS13280]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[FISUC_RS00460]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
 
** '''11''' reactions found over '''13''' reactions in the full pathway
 
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
 
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51629 51629]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32272 32272]
{{#set: ec-number=ec-1.1.98.6}}
+
{{#set: ec-number=ec-1.1.1.85}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=anaerobic ribonucleoside-triphosphate reductase}}
+
{{#set: common-name=3-isopropylmalate dehydrogenase}}
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 11:57, 15 January 2021

Reaction RXN-13158

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 3-isopropylmalate dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links