Difference between revisions of "FSU RS00725"

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(Created page with "Category:reaction == Reaction RXN-8800 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.57 ec-2.4.2.57] * direction: ** left-to-right == Reaction formula == * 1 AMP...")
(Created page with "Category:reaction == Reaction RXN-17918 == * direction: ** left-to-right * common-name: ** nad-dependent dna ligase liga == Reaction formula == * 1 5-Phospho-terminated-...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-8800 ==
+
== Reaction RXN-17918 ==
* ec-number:
 
** [http://enzyme.expasy.org/EC/2.4.2.57 ec-2.4.2.57]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** nad-dependent dna ligase liga
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[AMP]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[RIBOSE-15-BISPHOSPHATE]][c]
+
* 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS02525]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS00650]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea):
 
** '''5''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36976 36976]
 
{{#set: ec-number=ec-2.4.2.57}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=0}}
+
{{#set: common-name=nad-dependent dna ligase liga}}
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=2}}
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 12:03, 15 January 2021

Reaction RXN-17918

  • direction:
    • left-to-right
  • common-name:
    • nad-dependent dna ligase liga

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links