Difference between revisions of "FSU RS07065"

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(Created page with "Category:reaction == Reaction RXN-12263 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.103 ec-2.5.1.103] * direction: ** left-to-right == Reaction formula == * 2 ...")
(Created page with "Category:reaction == Reaction RXN-8800 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.57 ec-2.4.2.57] * direction: ** left-to-right == Reaction formula == * 1 AMP...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-12263 ==
+
== Reaction RXN-8800 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.103 ec-2.5.1.103]
+
** [http://enzyme.expasy.org/EC/2.4.2.57 ec-2.4.2.57]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-465]][c] '''+''' 1 [[PPI]][c]
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* 1 [[AMP]][c] '''+''' 1 [[Pi]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[RIBOSE-15-BISPHOSPHATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01865]]
 
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** Category: [[manual]]
 
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5875]], staphyloxanthin biosynthesis:
+
* [[PWY-5532]], nucleoside and nucleotide degradation (archaea):
−
** '''1''' reactions found over '''9''' reactions in the full pathway
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** '''5''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7072]], hopanoid biosynthesis (bacteria):
 
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** '''1''' reactions found over '''14''' reactions in the full pathway
 
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* [[PWY-6105]], botryococcenes and methylated squalene biosynthesis:
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6767]], 4,4'-diapolycopenedioate biosynthesis:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* RHEA:
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** [http://www.uniprot.org/uniprot/O69445 O69445]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36976 36976]
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** [http://www.uniprot.org/uniprot/P36596 P36596]
+
{{#set: ec-number=ec-2.4.2.57}}
−
** [http://www.uniprot.org/uniprot/O65688 O65688]
 
−
** [http://www.uniprot.org/uniprot/O23118 O23118]
 
−
** [http://www.uniprot.org/uniprot/O22107 O22107]
 
−
** [http://www.uniprot.org/uniprot/Q40472 Q40472]
 
−
** [http://www.uniprot.org/uniprot/O22106 O22106]
 
−
** [http://www.uniprot.org/uniprot/P53800 P53800]
 
−
** [http://www.uniprot.org/uniprot/P53799 P53799]
 
−
** [http://www.uniprot.org/uniprot/P53798 P53798]
 
−
** [http://www.uniprot.org/uniprot/P29704 P29704]
 
−
** [http://www.uniprot.org/uniprot/Q04903 Q04903]
 
−
** [http://www.uniprot.org/uniprot/Q42761 Q42761]
 
−
** [http://www.uniprot.org/uniprot/Q42760 Q42760]
 
−
** [http://www.uniprot.org/uniprot/P37268 P37268]
 
−
** [http://www.uniprot.org/uniprot/Q02769 Q02769]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00702 R00702]
 
−
{{#set: ec-number=ec-2.5.1.103}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=added for gap-filling}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=reactions_add_gp}}

Revision as of 12:03, 15 January 2021

Reaction RXN-8800

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5532, nucleoside and nucleotide degradation (archaea):
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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