Difference between revisions of "FSU RS01295"

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(Created page with "Category:reaction == Reaction RXN0-745 == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.98.6 ec-1.1.98.6] * direction: ** left-to-right * common-name: ** anaerobic ribo...")
(Created page with "Category:reaction == Reaction HOMOSERKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39] * direction: ** left-to-right == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-745 ==
+
== Reaction HOMOSERKIN-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.98.6 ec-1.1.98.6]
+
** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** anaerobic ribonucleoside-triphosphate reductase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DATP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS02335]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FISUC_RS00460]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FISUC_RS10855]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-7220]], adenosine deoxyribonucleotides de novo biosynthesis II:
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* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis:
** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-702]], L-methionine biosynthesis II (plants):
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=51617 51617]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
{{#set: ec-number=ec-1.1.98.6}}
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* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27722 P27722]
 +
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
 +
** [http://www.uniprot.org/uniprot/P04948 P04948]
 +
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
 +
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
 +
** [http://www.uniprot.org/uniprot/P44504 P44504]
 +
** [http://www.uniprot.org/uniprot/P52991 P52991]
 +
** [http://www.uniprot.org/uniprot/P00547 P00547]
 +
** [http://www.uniprot.org/uniprot/P07128 P07128]
 +
** [http://www.uniprot.org/uniprot/P17423 P17423]
 +
** [http://www.uniprot.org/uniprot/P73646 P73646]
 +
{{#set: ec-number=ec-2.7.1.39}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=anaerobic ribonucleoside-triphosphate reductase}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=added for gap-filling}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_add_gp}}
{{#set: reconstruction source=genome}}
 

Revision as of 12:03, 15 January 2021

Reaction HOMOSERKIN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-THRESYN-PWY, L-threonine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II (plants):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links