Difference between revisions of "FSU RS15580"

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(Created page with "Category:reaction == Reaction 2.3.1.180-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.180 ec-2.3.1.180] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-14372 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18] * direction: ** left-to-right * common-name: ** 1,4-alpha-glu...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.3.1.180-RXN ==
+
== Reaction RXN-14372 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.180 ec-2.3.1.180]
+
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 1,4-alpha-glucan branching protein glgb
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ACETYL-COA]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
+
* n [[Alpha-Amyloses]][c] '''=>''' n [[CPD-7043]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS00290]]
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* Gene: [[FISUC_RS15575]]
** Category: [[orthology]]
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** Category: [[annotation]]
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS01770]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-4381]], fatty acid biosynthesis initiation I:
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* [[PWY-622]], starch biosynthesis:
** '''2''' reactions found over '''3''' reactions in the full pathway
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** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: ec-number=ec-2.4.1.18}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12083 12083]
 
{{#set: ec-number=ec-2.3.1.180}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
+
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=bifidobacterium}}
+
{{#set: reconstruction source=genome}}

Revision as of 12:03, 15 January 2021

Reaction RXN-14372

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 1,4-alpha-glucan branching protein glgb

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-622, starch biosynthesis:
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links