Difference between revisions of "FSU RS00725"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-17918 == * direction: ** left-to-right * common-name: ** nad-dependent dna ligase liga == Reaction formula == * 1 5-Phospho-terminated-...")
(Created page with "Category:reaction == Reaction TRANS-RXN-141A == * direction: ** left-to-right == Reaction formula == * 1 CO+2[e] '''=>''' 1 CO+2[c] == Gene(s) associated with this...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17918 ==
+
== Reaction TRANS-RXN-141A ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** nad-dependent dna ligase liga
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
+
* 1 [[CO+2]][e] '''=>''' 1 [[CO+2]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS02525]]
+
* Gene: [[FSU_RS10565]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FISUC_RS00650]]
+
* Gene: [[FSU_RS06185]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32780 32780]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=nad-dependent dna ligase liga}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli|bifidobacterium}}

Revision as of 16:01, 18 March 2021

Reaction TRANS-RXN-141A

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links