Difference between revisions of "FISUC RS12065"

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(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] * direction: ** reversible == Reaction formula =...")
(Created page with "Category:reaction == Reaction NACGLCTRANS-RXN == * common-name: ** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alani...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction O-SUCCHOMOSERLYASE-RXN ==
+
== Reaction NACGLCTRANS-RXN ==
 +
* common-name:
 +
** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-β-n-acetylglucosaminlytransferase
 +
** undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
+
** [http://enzyme.expasy.org/EC/2.4.1.227 ec-2.4.1.227]
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
+
* 1 [[C5]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[C6]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS07240]]
+
* Gene: [[FSU_RS04695]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS07525]]
+
* Gene: [[FISUC_RS02805]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS02705]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
+
* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-801]], homocysteine and cysteine interconversion:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31230 31230]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05032 R05032]
−
* UNIPROT:
+
{{#set: common-name=undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase|udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-&beta;-n-acetylglucosaminlytransferase}}
−
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
+
{{#set: ec-number=ec-2.4.1.227}}
−
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
 
−
** [http://www.uniprot.org/uniprot/P38675 P38675]
 
−
** [http://www.uniprot.org/uniprot/P24601 P24601]
 
−
** [http://www.uniprot.org/uniprot/P00935 P00935]
 
−
** [http://www.uniprot.org/uniprot/O04981 O04981]
 
−
** [http://www.uniprot.org/uniprot/O04982 O04982]
 
−
** [http://www.uniprot.org/uniprot/O81334 O81334]
 
−
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 
−
{{#set: ec-number=ec-2.5.1.48}}
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bifidobacterium|faecalibacterium|ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 16:01, 18 March 2021

Reaction NACGLCTRANS-RXN

  • common-name:
    • udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-β-n-acetylglucosaminlytransferase
    • undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase
  • ec-number:
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PEPTIDOGLYCANSYN-PWY, peptidoglycan biosynthesis I (meso-diaminopimelate containing):
    • 3 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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