Difference between revisions of "FSU RS05345"

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(Created page with "Category:reaction == Reaction RXN0-5205 == * ec-number: ** [http://enzyme.expasy.org/EC/7.2.2.12 ec-7.2.2.12] * direction: ** left-to-right == Reaction formula == * 1 AT...")
(Created page with "Category:reaction == Reaction RXN0-6482 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56] * direction: ** left-to-right * common-name: ** ribonuclease...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN0-5205 ==
+
== Reaction RXN0-6482 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/7.2.2.12 ec-7.2.2.12]
+
** [http://enzyme.expasy.org/EC/2.7.7.56 ec-2.7.7.56]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** ribonuclease ph
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ZN+2]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ZN+2]][e]
+
* 1 [[CPD0-2353]][c] '''+''' n [[Pi]][c] '''=>''' n [[Ribonucleoside-Diphosphates]][c] '''+''' 1 [[tRNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS10345]]
+
* Gene: [[FSU_RS05020]]
** Category: [[orthology]]
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** Category: [[annotation]]
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS03130]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY0-1479]], tRNA processing:
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: ec-number=ec-2.7.7.56}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20622 20622]
 
{{#set: ec-number=ec-7.2.2.12}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=1}}
+
{{#set: common-name=ribonuclease ph}}
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=1}}
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 16:01, 18 March 2021

Reaction RXN0-6482

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • ribonuclease ph

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY0-1479, tRNA processing:
    • 5 reactions found over 10 reactions in the full pathway

Reconstruction information

External links