Difference between revisions of "FSU RS11010"

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(Created page with "Category:reaction == Reaction DIHYDROOROT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3] * direction: ** reversible * common-name: ** dihydroorota...")
(Created page with "Category:reaction == Reaction HISTIDPHOS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.15 ec-3.1.3.15] * direction: ** left-to-right * common-name: ** histidin...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIHYDROOROT-RXN ==
+
== Reaction HISTIDPHOS-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.2.3 ec-3.5.2.3]
+
** [http://enzyme.expasy.org/EC/3.1.3.15 ec-3.1.3.15]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** dihydroorotase
+
** histidinol-phosphatase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DI-H-OROTATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[L-HISTIDINOL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[HISTIDINOL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS03160]]
+
* Gene: [[FSU_RS13430]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS05740]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS01280]]
+
* Gene: [[FISUC_RS11465]]
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS07640]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS14690]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7790]], UMP biosynthesis II:
+
* [[HISTSYN-PWY]], L-histidine biosynthesis:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-7791]], UMP biosynthesis III:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5686]], UMP biosynthesis I:
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24299 24299]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14466 14466]
 +
* PIR:
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=D70002 D70002]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWEBHB DWEBHB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWECHB DWECHB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E81255 E81255]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=F64070 F64070]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S56280 S56280]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03013 R03013]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P08955 P08955]
+
** [http://www.uniprot.org/uniprot/O34411 O34411]
−
** [http://www.uniprot.org/uniprot/P27708 P27708]
+
** [http://www.uniprot.org/uniprot/P10368 P10368]
−
** [http://www.uniprot.org/uniprot/Q91437 Q91437]
+
** [http://www.uniprot.org/uniprot/P06987 P06987]
−
** [http://www.uniprot.org/uniprot/Q58885 Q58885]
+
** [http://www.uniprot.org/uniprot/Q9PM76 Q9PM76]
−
** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
+
** [http://www.uniprot.org/uniprot/P44327 P44327]
−
** [http://www.uniprot.org/uniprot/P25995 P25995]
+
** [http://www.uniprot.org/uniprot/P38635 P38635]
−
** [http://www.uniprot.org/uniprot/P20051 P20051]
+
{{#set: ec-number=ec-3.1.3.15}}
−
** [http://www.uniprot.org/uniprot/P06204 P06204]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P05020 P05020]
+
{{#set: common-name=histidinol-phosphatase}}
−
** [http://www.uniprot.org/uniprot/P31301 P31301]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
 
−
** [http://www.uniprot.org/uniprot/P46538 P46538]
 
−
** [http://www.uniprot.org/uniprot/P20054 P20054]
 
−
** [http://www.uniprot.org/uniprot/P05990 P05990]
 
−
** [http://www.uniprot.org/uniprot/Q06950 Q06950]
 
−
** [http://www.uniprot.org/uniprot/P72934 P72934]
 
−
** [http://www.uniprot.org/uniprot/P74438 P74438]
 
−
** [http://www.uniprot.org/uniprot/O04904 O04904]
 
−
** [http://www.uniprot.org/uniprot/P72170 P72170]
 
−
** [http://www.uniprot.org/uniprot/O76138 O76138]
 
−
** [http://www.uniprot.org/uniprot/O27199 O27199]
 
−
** [http://www.uniprot.org/uniprot/P48795 P48795]
 
−
</div>
 
−
{{#set: ec-number=ec-3.5.2.3}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=dihydroorotase}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=3}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bifidobacterium|genome|plantarum|faecalibacterium|ecoli}}
+
{{#set: reconstruction source=bthetaiotaomicron|ecoli|plantarum|genome}}

Revision as of 16:01, 18 March 2021

Reaction HISTIDPHOS-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • histidinol-phosphatase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISTSYN-PWY, L-histidine biosynthesis:
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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