Difference between revisions of "FISUC RS15245"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 2OXOGLUTARATEDEH-RXN == * common-name: ** 2-oxoglutarate dehydrogenase complex * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1...")
(Created page with "Category:gene == Gene FISUC_RS15245 == * common-name: ** coba * transcription-direction: ** negative * centisome-position: ** 97.1894 * left-end-position: ** 3734634 *...")
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction 2OXOGLUTARATEDEH-RXN ==
+
== Gene FISUC_RS15245 ==
 
* common-name:
 
* common-name:
−
** 2-oxoglutarate dehydrogenase complex
+
** coba
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/1.2.1.m9 ec-1.2.1.m9]
+
** negative
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 97.1894   
−
* synonymous:
+
* left-end-position:
−
** 2-oxoglutarate dehydrogenation
+
** 3734634
−
** α-ketoglutarate oxidative decarboxylation
+
* right-end-position:
−
== Reaction formula ==
+
** 3736211
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[SUC-COA]][c]
+
== Organism(s) associated with this gene  ==
−
== Gene(s) associated with this reaction  ==
+
* [[fibrobacter_23042021]]
−
== Pathway(s)  ==
+
== Reaction(s) associated ==
−
* [[TCA]], TCA cycle I (prokaryotic):
+
* [[RXN-13403]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** Category: [[annotation]]
−
* [[PWY-7254]], TCA cycle VII (acetate-producers):
+
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[RXN-8675]]
−
* [[PWY-5690]], TCA cycle II (plants and fungi):
+
** Category: [[annotation]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Reconstruction information  ==
+
* [[UROPORIIIMETHYLTRANSA-RXN]]
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
** Category: [[annotation]]
−
== External links  ==
+
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* RHEA:
+
== Pathway(s) associated ==
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27787 27787]
+
* [[PWY-5194]]
−
* LIGAND-RXN:
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
** [http://www.genome.jp/dbget-bin/www_bget?R08549 R08549]
+
* [[PWY-7377]]
−
{{#set: common-name=2-oxoglutarate dehydrogenase complex}}
+
** '''15''' reactions found over '''15''' reactions in the full pathway
−
{{#set: ec-number=ec-1.2.1.m9}}
+
* [[PWY-5196]]
−
{{#set: direction=left-to-right}}
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
{{#set: synonymous=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}}
+
* [[PWY-7376]]
−
{{#set: nb gene associated=0}}
+
** '''3''' reactions found over '''13''' reactions in the full pathway
−
{{#set: nb pathway associated=3}}
+
{{#set: common-name=coba}}
−
{{#set: reconstruction category=manual}}
+
{{#set: transcription-direction=negative}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: centisome-position=97.1894    }}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: left-end-position=3734634}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: right-end-position=3736211}}
 +
{{#set: organism associated=fibrobacter_23042021}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=4}}

Revision as of 18:11, 26 April 2021

Gene FISUC_RS15245

  • common-name:
    • coba
  • transcription-direction:
    • negative
  • centisome-position:
    • 97.1894
  • left-end-position:
    • 3734634
  • right-end-position:
    • 3736211

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5194
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7377
    • 15 reactions found over 15 reactions in the full pathway
  • PWY-5196
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7376
    • 3 reactions found over 13 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15245&oldid=78383"