Difference between revisions of "FISUC RS06230"

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(Created page with "Category:reaction == Reaction COBINPGUANYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62] * direction: ** left-to-right == Reaction formu...")
(Created page with "Category:gene == Gene FSU_RS13560 == * common-name: ** quef * transcription-direction: ** positive * centisome-position: ** 85.547035 * left-end-position: ** 3287576 *...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction COBINPGUANYLYLTRANS-RXN ==
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== Gene FSU_RS13560 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62]
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** quef
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[ADENOSYLCOBINAMIDE-P]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ADENOSYLCOBINAMIDE-GDP]][c] '''+''' 1 [[PPI]][c]
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** 85.547035   
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== Gene(s) associated with this reaction ==
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* left-end-position:
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== Pathway(s) ==
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** 3287576
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* [[PWY-7962]], adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
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* right-end-position:
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** '''6''' reactions found over '''6''' reactions in the full pathway
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** 3288052
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* [[PWY-7971]], adenosylcobinamide-GDP salvage from cobinamide I:
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== Organism(s) associated with this gene ==
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[fibrobacter_23042021]]
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* [[COBALSYN-PWY]], superpathway of adenosylcobalamin salvage from cobinamide I:
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== Reaction(s) associated ==
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** '''7''' reactions found over '''5''' reactions in the full pathway
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* [[RXN0-4022]]
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* [[PWY-7972]], adenosylcobinamideGDP salvage from cobinamide II:
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** Category: [[annotation]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-6269]], superpathway of adenosylcobalamin salvage from cobinamide II:
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** Category: [[orthology]]
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** '''7''' reactions found over '''6''' reactions in the full pathway
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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== Reconstruction information  ==
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== Pathway(s) associated ==
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* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach adenosylcobinamide-gdp
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* [[PWY-6700]]
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== External links  ==
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* RHEA:
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{{#set: common-name=quef}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22712 22712]
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{{#set: transcription-direction=positive}}
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* LIGAND-RXN:
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{{#set: centisome-position=85.547035    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R05222 R05222]
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{{#set: left-end-position=3287576}}
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{{#set: ec-number=ec-2.7.7.62}}
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{{#set: right-end-position=3288052}}
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{{#set: direction=left-to-right}}
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{{#set: organism associated=fibrobacter_23042021}}
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{{#set: nb gene associated=0}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=5}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=manual}}
 
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{{#set: reconstruction tool=curation}}
 
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{{#set: reconstruction comment=added to reach adenosylcobinamide-gdp}}
 
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{{#set: reconstruction source=reactions_add_adenosylcobalamin}}
 

Revision as of 18:11, 26 April 2021

Gene FSU_RS13560

  • common-name:
    • quef
  • transcription-direction:
    • positive
  • centisome-position:
    • 85.547035
  • left-end-position:
    • 3287576
  • right-end-position:
    • 3288052

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6700
    • 4 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS06230&oldid=78386"