Difference between revisions of "FSU RS04280"

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(Created page with "Category:reaction == Reaction 2.3.1.180-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.180 ec-2.3.1.180] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:gene == Gene FSU_RS09545 == * common-name: ** lpxa * transcription-direction: ** positive * centisome-position: ** 59.98245 * left-end-position: ** 2305128 *...")
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[[Category:reaction]]
+
[[Category:gene]]
== Reaction 2.3.1.180-RXN ==
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== Gene FSU_RS09545 ==
* ec-number:
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* common-name:
** [http://enzyme.expasy.org/EC/2.3.1.180 ec-2.3.1.180]
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** lpxa
* direction:
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* transcription-direction:
** left-to-right
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** positive
== Reaction formula ==
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* centisome-position:
* 1 [[ACETYL-COA]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Acetoacetyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
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** 59.98245   
== Gene(s) associated with this reaction  ==
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* left-end-position:
* Gene: [[FSU_RS00290]]
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** 2305128
 +
* right-end-position:
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** 2305895
 +
== Organism(s) associated with this gene  ==
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* [[fibrobacter_23042021]]
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== Reaction(s) associated ==
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* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
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** Category: [[annotation]]
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
== Pathway(s) ==
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
* [[PWY-4381]], fatty acid biosynthesis initiation I:
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== Pathway(s) associated ==
** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[NAGLIPASYN-PWY]]
== Reconstruction information  ==
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** '''6''' reactions found over '''6''' reactions in the full pathway
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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{{#set: common-name=lpxa}}
== External links  ==
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{{#set: transcription-direction=positive}}
* RHEA:
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{{#set: centisome-position=59.98245    }}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12083 12083]
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{{#set: left-end-position=2305128}}
{{#set: ec-number=ec-2.3.1.180}}
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{{#set: right-end-position=2305895}}
{{#set: direction=left-to-right}}
+
{{#set: organism associated=fibrobacter_23042021}}
{{#set: nb gene associated=1}}
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{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=bifidobacterium}}
 

Revision as of 18:11, 26 April 2021

Gene FSU_RS09545

  • common-name:
    • lpxa
  • transcription-direction:
    • positive
  • centisome-position:
    • 59.98245
  • left-end-position:
    • 2305128
  • right-end-position:
    • 2305895

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated