Difference between revisions of "FSU RS02780"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ASPARTATEKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4] * direction: ** left-to-right * common-name: ** aspartat...")
(Created page with "Category:gene == Gene FSU_RS02780 == * transcription-direction: ** positive * centisome-position: ** 16.910105 * left-end-position: ** 649856 * right-end-position: **...")
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction ASPARTATEKIN-RXN ==
+
== Gene FSU_RS02780 ==
−
* ec-number:
+
* transcription-direction:
−
** [http://enzyme.expasy.org/EC/2.7.2.4 ec-2.7.2.4]
+
** positive
−
* direction:
+
* centisome-position:
−
** left-to-right
+
** 16.910105   
−
* common-name:
+
* left-end-position:
−
** aspartate kinase
+
** 649856
−
== Reaction formula ==
+
* right-end-position:
−
* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-BETA-ASPARTYL-P]][c]
+
** 651136
−
== Gene(s) associated with this reaction  ==
+
== Organism(s) associated with this gene  ==
−
* Gene: [[FISUC_RS06845]]
+
* [[fibrobacter_23042021]]
 +
== Reaction(s) associated ==
 +
* [[INORGPYROPHOSPHAT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FSU_RS08755]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
== Pathway(s) associated ==
−
== Pathway(s) ==
+
* [[PWY-7805]]
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-2941]], L-lysine biosynthesis II:
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6559]], spermidine biosynthesis II:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5097]], L-lysine biosynthesis VI:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]], L-lysine biosynthesis III:
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7153]], grixazone biosynthesis:
 
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
** '''2''' reactions found over '''8''' reactions in the full pathway
−
* [[P101-PWY]], ectoine biosynthesis:
+
* [[PWY-7807]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]], L-homoserine biosynthesis:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6562]], norspermidine biosynthesis:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7977]], L-methionine biosynthesis IV (archaea):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6160]], 3-dehydroquinate biosynthesis II (archaea):
 
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
−
</div>
+
{{#set: transcription-direction=positive}}
−
== Reconstruction information  ==
+
{{#set: centisome-position=16.910105    }}
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: left-end-position=649856}}
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: right-end-position=651136}}
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
{{#set: organism associated=fibrobacter_23042021}}
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: nb reaction associated=1}}
−
== External links  ==
+
{{#set: nb pathway associated=2}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23779 23779]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00480 R00480]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P08495 P08495]
 
−
** [http://www.uniprot.org/uniprot/P44505 P44505]
 
−
** [http://www.uniprot.org/uniprot/P27725 P27725]
 
−
** [http://www.uniprot.org/uniprot/Q04795 Q04795]
 
−
** [http://www.uniprot.org/uniprot/Q57991 Q57991]
 
−
** [http://www.uniprot.org/uniprot/P00561 P00561]
 
−
** [http://www.uniprot.org/uniprot/P00562 P00562]
 
−
** [http://www.uniprot.org/uniprot/Q9PHT4 Q9PHT4]
 
−
** [http://www.uniprot.org/uniprot/Q9JTN3 Q9JTN3]
 
−
** [http://www.uniprot.org/uniprot/P53553 P53553]
 
−
** [http://www.uniprot.org/uniprot/P10869 P10869]
 
−
** [http://www.uniprot.org/uniprot/P08660 P08660]
 
−
** [http://www.uniprot.org/uniprot/P26512 P26512]
 
−
** [http://www.uniprot.org/uniprot/P37142 P37142]
 
−
** [http://www.uniprot.org/uniprot/P41403 P41403]
 
−
** [http://www.uniprot.org/uniprot/P0A4Z9 P0A4Z9]
 
−
** [http://www.uniprot.org/uniprot/Q9SA18 Q9SA18]
 
−
** [http://www.uniprot.org/uniprot/P49079 P49079]
 
−
** [http://www.uniprot.org/uniprot/P49080 P49080]
 
−
** [http://www.uniprot.org/uniprot/P93402 P93402]
 
−
** [http://www.uniprot.org/uniprot/O81852 O81852]
 
−
** [http://www.uniprot.org/uniprot/O63067 O63067]
 
−
** [http://www.uniprot.org/uniprot/O65027 O65027]
 
−
</div>
 
−
{{#set: ec-number=ec-2.7.2.4}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=aspartate kinase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=11}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=bthetaiotaomicron|ecoli|plantarum|genome}}
 

Revision as of 18:11, 26 April 2021

Gene FSU_RS02780

  • transcription-direction:
    • positive
  • centisome-position:
    • 16.910105
  • left-end-position:
    • 649856
  • right-end-position:
    • 651136

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS02780&oldid=78421"