Difference between revisions of "FISUC RS12065"

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(Created page with "Category:reaction == Reaction NACGLCTRANS-RXN == * common-name: ** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alani...")
(Created page with "Category:gene == Gene FSU_RS11000 == * transcription-direction: ** negative * centisome-position: ** 69.99129 * left-end-position: ** 2689768 * right-end-position: **...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction NACGLCTRANS-RXN ==
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== Gene FSU_RS11000 ==
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* common-name:
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* transcription-direction:
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** udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-β-n-acetylglucosaminlytransferase
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** negative
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** undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase
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* centisome-position:
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* ec-number:
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** 69.99129   
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** [http://enzyme.expasy.org/EC/2.4.1.227 ec-2.4.1.227]
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* left-end-position:
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* direction:
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** 2689768
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** reversible
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* right-end-position:
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== Reaction formula ==
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** 2691888
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* 1 [[C5]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''<=>''' 1 [[C6]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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== Organism(s) associated with this gene  ==
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== Gene(s) associated with this reaction  ==
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* [[fibrobacter_23042021]]
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* Gene: [[FSU_RS04695]]
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== Reaction(s) associated ==
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* [[GLUTAMINESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS02805]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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== Pathway(s) ==
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* [[PWY-381]]
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* [[PEPTIDOGLYCANSYN-PWY]], peptidoglycan biosynthesis I (meso-diaminopimelate containing):
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** '''3''' reactions found over '''2''' reactions in the full pathway
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* [[GLNSYN-PWY]]
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== Reconstruction information  ==
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-6963]]
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== External links  ==
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** '''4''' reactions found over '''2''' reactions in the full pathway
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* RHEA:
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* [[PWY-6964]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31230 31230]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* LIGAND-RXN:
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* [[PWY-6549]]
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** [http://www.genome.jp/dbget-bin/www_bget?R05032 R05032]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: common-name=undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase|udp-n-acetyl-d-glucosamine:n-acetylmuramoyl-l-alanyl-d-glutamyl-meso-2,6-diaminopimelyl-d-alanyl-d-alanine-diphosphoundecaprenol 4-&beta;-n-acetylglucosaminlytransferase}}
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* [[PWY490-3]]
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{{#set: ec-number=ec-2.4.1.227}}
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: direction=reversible}}
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* [[PWY-5675]]
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{{#set: nb gene associated=2}}
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: nb pathway associated=1}}
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{{#set: transcription-direction=negative}}
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{{#set: reconstruction category=annotation}}
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{{#set: centisome-position=69.99129    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: left-end-position=2689768}}
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{{#set: reconstruction comment=n.a}}
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{{#set: right-end-position=2691888}}
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{{#set: reconstruction source=genome}}
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{{#set: organism associated=fibrobacter_23042021}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=7}}

Revision as of 18:11, 26 April 2021

Gene FSU_RS11000

  • transcription-direction:
    • negative
  • centisome-position:
    • 69.99129
  • left-end-position:
    • 2689768
  • right-end-position:
    • 2691888

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-381
    • 1 reactions found over 3 reactions in the full pathway
  • GLNSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6963
    • 4 reactions found over 2 reactions in the full pathway
  • PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6549
    • 8 reactions found over 9 reactions in the full pathway
  • PWY490-3
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5675
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12065&oldid=78424"