Difference between revisions of "FSU RS04505"

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(Created page with "Category:reaction == Reaction ARGSUCCINSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5] * direction: ** left-to-right * common-name: ** arginino...")
(Created page with "Category:gene == Gene FSU_RS07490 == * transcription-direction: ** negative * centisome-position: ** 47.550095 * left-end-position: ** 1827352 * right-end-position: **...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ARGSUCCINSYN-RXN ==
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== Gene FSU_RS07490 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/6.3.4.5 ec-6.3.4.5]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 47.550095   
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* common-name:
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* left-end-position:
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** argininosuccinate synthase
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** 1827352
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== Reaction formula ==
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* right-end-position:
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* 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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** 1829469
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS05065]]
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* [[fibrobacter_23042021]]
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== Reaction(s) associated ==
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* [[GLUTAMINESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS03175]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Pathway(s) associated ==
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== Pathway(s) ==
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* [[PWY-381]]
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* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLNSYN-PWY]]
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* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6963]]
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
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** '''4''' reactions found over '''2''' reactions in the full pathway
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6964]]
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6549]]
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY490-3]]
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* [[PWY-4984]], urea cycle:
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** '''2''' reactions found over '''4''' reactions in the full pathway
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5675]]
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== Reconstruction information  ==
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: transcription-direction=negative}}
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== External links  ==
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{{#set: centisome-position=47.550095    }}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: left-end-position=1827352}}
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* RHEA:
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{{#set: right-end-position=1829469}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
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{{#set: organism associated=fibrobacter_23042021}}
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* LIGAND-RXN:
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{{#set: nb reaction associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
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{{#set: nb pathway associated=7}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P22768 P22768]
 
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** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
 
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** [http://www.uniprot.org/uniprot/P00966 P00966]
 
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** [http://www.uniprot.org/uniprot/P16460 P16460]
 
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** [http://www.uniprot.org/uniprot/P13256 P13256]
 
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** [http://www.uniprot.org/uniprot/P13257 P13257]
 
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** [http://www.uniprot.org/uniprot/P09034 P09034]
 
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** [http://www.uniprot.org/uniprot/P24532 P24532]
 
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** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
 
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** [http://www.uniprot.org/uniprot/P57799 P57799]
 
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** [http://www.uniprot.org/uniprot/Q60174 Q60174]
 
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** [http://www.uniprot.org/uniprot/P44315 P44315]
 
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** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
 
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** [http://www.uniprot.org/uniprot/P50986 P50986]
 
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** [http://www.uniprot.org/uniprot/Q06734 Q06734]
 
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** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
 
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** [http://www.uniprot.org/uniprot/Q59491 Q59491]
 
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</div>
 
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{{#set: ec-number=ec-6.3.4.5}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=argininosuccinate synthase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Revision as of 18:11, 26 April 2021

Gene FSU_RS07490

  • transcription-direction:
    • negative
  • centisome-position:
    • 47.550095
  • left-end-position:
    • 1827352
  • right-end-position:
    • 1829469

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-381
    • 1 reactions found over 3 reactions in the full pathway
  • GLNSYN-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6963
    • 4 reactions found over 2 reactions in the full pathway
  • PWY-6964
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6549
    • 8 reactions found over 9 reactions in the full pathway
  • PWY490-3
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5675
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04505&oldid=78446"