Difference between revisions of "FISUC RS06965"

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(Created page with "Category:reaction == Reaction GLUTAMATE-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2] * direction: ** left-to-right == Reaction for...")
(Created page with "Category:gene == Gene FISUC_RS11335 == * common-name: ** nadc * transcription-direction: ** positive * centisome-position: ** 72.32460 * left-end-position: ** 2779170...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction GLUTAMATE-DEHYDROGENASE-RXN ==
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== Gene FISUC_RS11335 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/1.4.1.2 ec-1.4.1.2]
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** nadc
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* direction:
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* transcription-direction:
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** left-to-right
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[GLT]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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** 72.32460   
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== Gene(s) associated with this reaction  ==
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* left-end-position:
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* Gene: [[FSU_RS00325]]
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** 2779170
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** Category: [[orthology]]
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* right-end-position:
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** 2780033
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== Pathway(s) ==
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== Organism(s) associated with this gene  ==
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* [[PWY-5022]], 4-aminobutanoate degradation V:
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* [[fibrobacter_23042021]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[PWY-7126]], ethylene biosynthesis IV (engineered):
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* [[QUINOPRIBOTRANS-RXN]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** Category: [[annotation]]
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* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''1''' reactions found over '''11''' reactions in the full pathway
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== Pathway(s) associated ==
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* [[GLUTAMATE-DEG1-PWY]], L-glutamate degradation I:
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* [[PWY-7342]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6728]], methylaspartate cycle:
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* [[PWY-5316]]
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** '''9''' reactions found over '''19''' reactions in the full pathway
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** '''2''' reactions found over '''9''' reactions in the full pathway
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* [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate):
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* [[PYRIDNUCSYN-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PWY-5653]]
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== External links  ==
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{{#set: common-name=nadc}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: transcription-direction=positive}}
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* RHEA:
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{{#set: centisome-position=72.32460    }}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15136 15136]
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{{#set: left-end-position=2779170}}
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* LIGAND-RXN:
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{{#set: right-end-position=2780033}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00243 R00243]
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{{#set: organism associated=fibrobacter_23042021}}
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* UNIPROT:
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/P20016 P20016]
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/P28997 P28997]
 
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** [http://www.uniprot.org/uniprot/P41755 P41755]
 
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** [http://www.uniprot.org/uniprot/Q9JTP6 Q9JTP6]
 
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** [http://www.uniprot.org/uniprot/P00365 P00365]
 
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** [http://www.uniprot.org/uniprot/P93541 P93541]
 
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** [http://www.uniprot.org/uniprot/P80319 P80319]
 
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** [http://www.uniprot.org/uniprot/P24295 P24295]
 
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** [http://www.uniprot.org/uniprot/P27346 P27346]
 
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** [http://www.uniprot.org/uniprot/P33327 P33327]
 
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** [http://www.uniprot.org/uniprot/Q43260 Q43260]
 
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** [http://www.uniprot.org/uniprot/O04937 O04937]
 
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** [http://www.uniprot.org/uniprot/Q25415 Q25415]
 
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** [http://www.uniprot.org/uniprot/O74024 O74024]
 
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** [http://www.uniprot.org/uniprot/O59650 O59650]
 
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</div>
 
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{{#set: ec-number=ec-1.4.1.2}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=bthetaiotaomicron}}
 

Revision as of 18:11, 26 April 2021

Gene FISUC_RS11335

  • common-name:
    • nadc
  • transcription-direction:
    • positive
  • centisome-position:
    • 72.32460
  • left-end-position:
    • 2779170
  • right-end-position:
    • 2780033

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7342
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5316
    • 2 reactions found over 9 reactions in the full pathway
  • PYRIDNUCSYN-PWY
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5653
    • 3 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS06965&oldid=78452"