Difference between revisions of "FSU RS04330"

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(Created page with "Category:reaction == Reaction O-SUCCINYLBENZOATE-COA-SYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.113 ec-4.2.1.113] * direction: ** left-to-right == React...")
(Created page with "Category:gene == Gene FSU_RS13360 == * transcription-direction: ** positive * centisome-position: ** 84.28604 * left-end-position: ** 3239116 * right-end-position: **...")
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[[Category:reaction]]
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[[Category:gene]]
== Reaction O-SUCCINYLBENZOATE-COA-SYN-RXN ==
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== Gene FSU_RS13360 ==
* ec-number:
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* transcription-direction:
** [http://enzyme.expasy.org/EC/4.2.1.113 ec-4.2.1.113]
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** positive
* direction:
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* centisome-position:
** left-to-right
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** 84.28604   
== Reaction formula ==
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* left-end-position:
* 1 [[CPD-9923]][c] '''=>''' 1 [[O-SUCCINYLBENZOATE]][c] '''+''' 1 [[WATER]][c]
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** 3239116
== Gene(s) associated with this reaction ==
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* right-end-position:
== Pathway(s) ==
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** 3239835
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
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== Organism(s) associated with this gene ==
** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[fibrobacter_23042021]]
== Reconstruction information  ==
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== Reaction(s) associated ==
* category: [[manual]]; source: [[reactions_add_gp2]]; tool: [[curation]]; comment: added for gap-filling
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* [[LIPIDXSYNTHESIS-RXN]]
== External links  ==
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** Category: [[annotation]]
* RHEA:
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10197 10197]
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** Category: [[orthology]]
* LIGAND-RXN:
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
** [http://www.genome.jp/dbget-bin/www_bget?R04031 R04031]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
{{#set: ec-number=ec-4.2.1.113}}
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== Pathway(s) associated ==
{{#set: direction=left-to-right}}
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* [[NAGLIPASYN-PWY]]
{{#set: nb gene associated=0}}
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** '''6''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=84.28604    }}
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{{#set: left-end-position=3239116}}
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{{#set: right-end-position=3239835}}
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{{#set: organism associated=fibrobacter_23042021}}
 +
{{#set: nb reaction associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction comment=added for gap-filling}}
 
{{#set: reconstruction source=reactions_add_gp2}}
 

Revision as of 18:11, 26 April 2021

Gene FSU_RS13360

  • transcription-direction:
    • positive
  • centisome-position:
    • 84.28604
  • left-end-position:
    • 3239116
  • right-end-position:
    • 3239835

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated