Difference between revisions of "FSU RS07805"

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(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1] * direction: ** left-to-right == Reaction formula...")
(Created page with "Category:gene == Gene FISUC_RS13965 == * common-name: ** tils * transcription-direction: ** negative * centisome-position: ** 89.29196 * left-end-position: ** 3431164...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ACETATE--COA-LIGASE-RXN ==
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== Gene FISUC_RS13965 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
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** tils
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* direction:
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* transcription-direction:
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** left-to-right
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** negative
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== Reaction formula ==
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* centisome-position:
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* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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** 89.29196   
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== Gene(s) associated with this reaction ==
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* left-end-position:
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* Gene: [[FSU_RS01410]]
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** 3431164
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** Category: [[orthology]]
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* right-end-position:
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** 3432345
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* Gene: [[FISUC_RS15220]]
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== Organism(s) associated with this gene ==
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** Category: [[orthology]]
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* [[fibrobacter_23042021]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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== Pathway(s) ==
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* [[RXN-1961]]
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* [[PWY66-161]], ethanol degradation III:
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** Category: [[annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-6672]], cis-genanyl-CoA degradation:
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{{#set: common-name=tils}}
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** '''1''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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* [[PWY-7118]], chitin degradation to ethanol:
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{{#set: centisome-position=89.29196    }}
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** '''3''' reactions found over '''6''' reactions in the full pathway
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{{#set: left-end-position=3431164}}
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* [[PWY0-1313]], acetate conversion to acetyl-CoA:
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{{#set: right-end-position=3432345}}
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: organism associated=fibrobacter_23042021}}
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* [[PWY66-21]], ethanol degradation II:
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{{#set: nb reaction associated=1}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY66-162]], ethanol degradation IV:
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P27095 P27095]
 
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** [http://www.uniprot.org/uniprot/P31638 P31638]
 
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** [http://www.uniprot.org/uniprot/Q12662 Q12662]
 
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** [http://www.uniprot.org/uniprot/P28812 P28812]
 
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** [http://www.uniprot.org/uniprot/P27550 P27550]
 
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** [http://www.uniprot.org/uniprot/O34613 O34613]
 
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** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
 
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** [http://www.uniprot.org/uniprot/P36333 P36333]
 
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** [http://www.uniprot.org/uniprot/Q01574 Q01574]
 
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** [http://www.uniprot.org/uniprot/P39062 P39062]
 
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** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 
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** [http://www.uniprot.org/uniprot/P52910 P52910]
 
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** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 
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** [http://www.uniprot.org/uniprot/P16928 P16928]
 
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** [http://www.uniprot.org/uniprot/P16929 P16929]
 
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** [http://www.uniprot.org/uniprot/O68040 O68040]
 
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** [http://www.uniprot.org/uniprot/P78773 P78773]
 
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</div>
 
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{{#set: ec-number=ec-6.2.1.1}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=6}}
 
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{{#set: reconstruction category=orthology}}
 
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{{#set: reconstruction tool=orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli}}
 

Revision as of 18:11, 26 April 2021

Gene FISUC_RS13965

  • common-name:
    • tils
  • transcription-direction:
    • negative
  • centisome-position:
    • 89.29196
  • left-end-position:
    • 3431164
  • right-end-position:
    • 3432345

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS07805&oldid=78493"