Difference between revisions of "GLUTKIN-RXN"

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(Created page with "Category:reaction == Reaction ABC-14-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/7.4.2.1 ec-7.4.2.1] * direction: ** left-to-right == Reaction formula == * 1 ATP...")
(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8] * direction: ** left-to-right * common-name: ** glutama...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ABC-14-RXN ==
+
== Reaction GSAAMINOTRANS-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/7.4.2.1 ec-7.4.2.1]
+
** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** glutamate-1-semialdehyde 2,1-aminomutase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HIS]][e] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[HIS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS14565]]
+
* Gene: [[FISUC_RS15225]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS14560]]
+
* Gene: [[FSU_RS01415]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS14570]]
+
** Category: [[orthology]]
−
** Category: [[manual]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-7.4.2.1}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P18492 P18492]
 +
** [http://www.uniprot.org/uniprot/P21267 P21267]
 +
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
 +
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
 +
** [http://www.uniprot.org/uniprot/P23893 P23893]
 +
** [http://www.uniprot.org/uniprot/O26330 O26330]
 +
** [http://www.uniprot.org/uniprot/P30949 P30949]
 +
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
 +
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
 +
** [http://www.uniprot.org/uniprot/O29027 O29027]
 +
** [http://www.uniprot.org/uniprot/P45621 P45621]
 +
** [http://www.uniprot.org/uniprot/P24630 P24630]
 +
** [http://www.uniprot.org/uniprot/P31593 P31593]
 +
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 +
** [http://www.uniprot.org/uniprot/P48247 P48247]
 +
** [http://www.uniprot.org/uniprot/P46716 P46716]
 +
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 +
** [http://www.uniprot.org/uniprot/O74061 O74061]
 +
</div>
 +
{{#set: ec-number=ec-5.4.3.8}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=3}}
+
{{#set: common-name=glutamate-1-semialdehyde 2,1-aminomutase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
−
{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 17:06, 14 October 2022

Reaction GSAAMINOTRANS-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • glutamate-1-semialdehyde 2,1-aminomutase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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