Difference between revisions of "RXN-11479"

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(Created page with "Category:reaction == Reaction 4.1.1.82-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.82 ec-4.1.1.82] * direction: ** left-to-right * common-name: ** phosphonop...")
(Created page with "Category:reaction == Reaction SUCCINATE-DEHYDROGENASE-UBIQUINONE6-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.5.1 ec-1.3.5.1] * direction: ** left-to-right * s...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.1.1.82-RXN ==
+
== Reaction SUCCINATE-DEHYDROGENASE-UBIQUINONE6-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.82 ec-4.1.1.82]
+
** [http://enzyme.expasy.org/EC/1.3.5.1 ec-1.3.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* synonymous:
−
** phosphonopyruvate decarboxylase
+
** fumaric hydrogenase
 +
** fumarate reduction
 +
** fumarate dehydrogenase
 +
** fumarate reductase
 +
** succinate dehydrogenation
 +
** succinic dehydrogenase
 +
** succinate oxidation
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-235]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-551]][c]
+
* 1 [[SUC]][c] '''+''' 1 [[UBIQUINONE-6]][c] '''=>''' 1 [[FUM]][c] '''+''' 1 [[UBIQUINOL-30]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06845]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[FISUC_RS12535]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FISUC_RS04955]]
+
* Gene: [[FISUC_RS12585]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12540]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FISUC_RS12545]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14510]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14555]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14505]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS14515]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6839]], 2-aminoethylphosphonate biosynthesis:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7510]], rhizocticin A and B biosynthesis:
 
−
** '''2''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5757]], fosfomycin biosynthesis:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6322]], phosphinothricin tripeptide biosynthesis:
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
−
* [[PWY-6682]], dehydrophos biosynthesis:
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7769]], phosalacine biosynthesis:
 
−
** '''2''' reactions found over '''25''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-1.3.5.1}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20769 20769]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04053 R04053]
 
−
{{#set: ec-number=ec-4.1.1.82}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phosphonopyruvate decarboxylase}}
+
{{#set: synonymous=succinic dehydrogenase|fumarate dehydrogenase|fumarate reduction|fumaric hydrogenase|succinate dehydrogenation|fumarate reductase|succinate oxidation}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=8}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 17:08, 14 October 2022

Reaction SUCCINATE-DEHYDROGENASE-UBIQUINONE6-RXN

  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • fumaric hydrogenase
    • fumarate reduction
    • fumarate dehydrogenase
    • fumarate reductase
    • succinate dehydrogenation
    • succinic dehydrogenase
    • succinate oxidation

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-11479&oldid=81811"