Difference between revisions of "FSU RS13560"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene FISUC_RS06230 == * transcription-direction: ** positive * centisome-position: ** 40.146305 * left-end-position: ** 1542676 * right-end-position:...")
(Created page with "Category:gene == Gene FSU_RS01090 == * transcription-direction: ** positive * centisome-position: ** 6.751593 * left-end-position: ** 259464 * right-end-position: ** 2...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FISUC_RS06230 ==
+
== Gene FSU_RS01090 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* centisome-position:
 
* centisome-position:
−
** 40.146305    
+
** 6.751593    
 
* left-end-position:
 
* left-end-position:
−
** 1542676
+
** 259464
 
* right-end-position:
 
* right-end-position:
−
** 1546068
+
** 260453
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_23042021]]
+
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 +
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.4.1.129-RXN]]
+
* [[P101-PWY]]
−
** Category: [[annotation]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[HOMOSERSYN-PWY]]
−
* [[RXN-11291]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** Category: [[annotation]]
+
* [[PWY-6562]]
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[RXN-11301]]
+
* [[PWY-7977]]
−
** Category: [[annotation]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PWY-6160]]
−
* [[RXN-11348]]
+
** '''2''' reactions found over '''7''' reactions in the full pathway
−
** Category: [[annotation]]
+
* [[PWY-2941]]
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[RXN-11350]]
+
* [[PWY-6559]]
−
** Category: [[annotation]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PWY-5097]]
−
* [[RXN-14712]]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
** Category: [[annotation]]
+
* [[DAPLYSINESYN-PWY]]
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[RXN-15521]]
+
* [[PWY-2942]]
−
** Category: [[annotation]]
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PWY-7153]]
−
* [[RXN-16650]]
+
** '''2''' reactions found over '''8''' reactions in the full pathway
−
** Category: [[annotation]]
 
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
</div>
 
</div>
−
== Pathway(s) associated ==
 
−
* [[PWY-6385]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5265]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6470]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6471]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY0-1586]]
 
−
** '''4''' reactions found over '''12''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=40.146305   }}
+
{{#set: centisome-position=6.751593   }}
−
{{#set: left-end-position=1542676}}
+
{{#set: left-end-position=259464}}
−
{{#set: right-end-position=1546068}}
+
{{#set: right-end-position=260453}}
−
{{#set: organism associated=fibrobacter_23042021}}
+
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=11}}

Revision as of 17:12, 14 October 2022

Gene FSU_RS01090

  • transcription-direction:
    • positive
  • centisome-position:
    • 6.751593
  • left-end-position:
    • 259464
  • right-end-position:
    • 260453

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P101-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • HOMOSERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6562
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7977
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6160
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-2941
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6559
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5097
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-2942
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7153
    • 2 reactions found over 8 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13560&oldid=83805"