Difference between revisions of "FISUC RS12165"

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(Created page with "Category:gene == Gene FSU_RS14875 == * transcription-direction: ** negative * centisome-position: ** 93.98783 * left-end-position: ** 3611956 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS05775 == * transcription-direction: ** negative * centisome-position: ** 36.111774 * left-end-position: ** 1387777 * right-end-position: **...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS14875 ==
+
== Gene FSU_RS05775 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* centisome-position:
 
* centisome-position:
−
** 93.98783    
+
** 36.111774    
 
* left-end-position:
 
* left-end-position:
−
** 3611956
+
** 1387777
 
* right-end-position:
 
* right-end-position:
−
** 3613065
+
** 1389156
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_23042021]]
+
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HISTAMINOTRANS-RXN]]
+
* [[2.7.7.13-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[MANNPGUANYLTRANGDP-RXN]]
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[manual]]
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
+
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
+
* [[MANNPISOM-RXN]]
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TYROSINE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5659]]
−
* [[HISTSYN-PWY]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5048]]
 
−
** '''1''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5886]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY3O-4108]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5151]]
+
* [[PWY-882]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[TYRFUMCAT-PWY]]
+
* [[PWY-3881]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7514]]
 
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7518]]
+
* [[PWY-7586]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-8016]]
+
* [[PWY-6992]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-3581]]
+
* [[PWY-3861]]
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5754]]
+
* [[MANNCAT-PWY]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[TYRSYN]]
+
* [[PWY-7456]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=93.98783   }}
+
{{#set: centisome-position=36.111774   }}
−
{{#set: left-end-position=3611956}}
+
{{#set: left-end-position=1387777}}
−
{{#set: right-end-position=3613065}}
+
{{#set: right-end-position=1389156}}
−
{{#set: organism associated=fibrobacter_23042021}}
+
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=8}}

Revision as of 17:12, 14 October 2022

Gene FSU_RS05775

  • transcription-direction:
    • negative
  • centisome-position:
    • 36.111774
  • left-end-position:
    • 1387777
  • right-end-position:
    • 1389156

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5659
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-882
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-3881
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7586
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6992
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-3861
    • 1 reactions found over 4 reactions in the full pathway
  • MANNCAT-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7456
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12165&oldid=83831"