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| Line 1: |
Line 1: |
| | [[Category:gene]] | | [[Category:gene]] |
| − | == Gene FSU_RS01605 == | + | == Gene FSU_RS04440 == |
| − | * common-name:
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| − | ** fabf
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| − | * transcription-direction:
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| − | ** negative
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| − | * centisome-position:
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| − | ** 9.920547
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| − | * left-end-position:
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| − | ** 381247
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| − | * right-end-position:
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| − | ** 382491
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| | == Organism(s) associated with this gene == | | == Organism(s) associated with this gene == |
| − | * [[fibrobacter_23042021]] | + | * [[fsucgem]] |
| | == Reaction(s) associated == | | == Reaction(s) associated == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * [[ARYLSULFAT-RXN]] |
| − | * [[2.3.1.179-RXN]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[2.3.1.41-RXN]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | ** Category: [[orthology]]
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| − | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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| − | * [[3-OXOACYL-ACP-SYNTH-RXN]] | |
| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-10059]]
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| | ** Category: [[manual]] | | ** Category: [[manual]] |
| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model. | + | *** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars |
| − | * [[RXN-10654]]
| + | {{#set: organism associated=fsucgem}} |
| − | ** Category: [[annotation]]
| + | {{#set: nb reaction associated=1}} |
| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-10658]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-11474]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-11479]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-16615]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-16621]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-16625]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-16629]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * [[RXN-8391]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9516]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9523]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9527]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9531]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9535]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9539]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN-9632]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
| |
| − | * [[RXN-9648]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN-9650]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
| |
| − | * [[RXN-9651]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
| |
| − | * [[RXN-9652]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN-9653]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN-9654]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN0-2141]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN1G-368]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN1G-445]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN1G-460]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * [[RXN1G-499]]
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| − | ** Category: [[manual]]
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| − | *** source: [[reactions_add_147_emile_annot]]; tool: [[unknown-tool]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
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| − | * [[RXN3O-1803]]
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| − | ** Category: [[annotation]]
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| − | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | </div>
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| − | == Pathway(s) associated ==
| |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * [[PWY-5973]]
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| − | ** '''3''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-5966]]
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| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
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| − | * [[PWY-5965]]
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| − | ** '''2''' reactions found over '''2''' reactions in the full pathway
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| − | * [[FASYN-INITIAL-PWY]]
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| − | ** '''5''' reactions found over '''2''' reactions in the full pathway
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| − | * [[PWY-7388]]
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| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
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| − | * [[FASYN-ELONG-PWY]]
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| − | ** '''3''' reactions found over '''5''' reactions in the full pathway
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| − | * [[PWY-6113]]
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| − | ** '''7''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWYG-321]]
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| − | ** '''12''' reactions found over '''182''' reactions in the full pathway
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| − | * [[PWY-6282]]
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| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
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| − | * [[PWY-6519]]
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| − | ** '''11''' reactions found over '''11''' reactions in the full pathway
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| − | * [[PWY-7664]]
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| − | ** '''10''' reactions found over '''14''' reactions in the full pathway
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| − | * [[PWY-7663]]
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| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
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| − | * [[PWY-5367]]
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| − | ** '''2''' reactions found over '''6''' reactions in the full pathway
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| − | * [[PWY-5971]]
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| − | ** '''22''' reactions found over '''31''' reactions in the full pathway
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| − | * [[PWY-5989]]
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| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
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| − | * [[PWY-5994]]
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| − | ** '''20''' reactions found over '''31''' reactions in the full pathway
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| − | * [[PWY-7858]]
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| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
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| − | * [[PWY0-862]]
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| − | ** '''4''' reactions found over '''6''' reactions in the full pathway
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| − | * [[PWY3O-355]]
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| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
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| − | </div>
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| − | {{#set: common-name=fabf}}
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| − | {{#set: transcription-direction=negative}}
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| − | {{#set: centisome-position=9.920547 }}
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| − | {{#set: left-end-position=381247}}
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| − | {{#set: right-end-position=382491}}
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| − | {{#set: organism associated=fibrobacter_23042021}} | |
| − | {{#set: nb reaction associated=33}} | |
| − | {{#set: nb pathway associated=19}}
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