Difference between revisions of "TRANS-RXN0-0244"

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(Created page with "Category:reaction == Reaction RXN-11501 == * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22] * direction: ** left-to-right == Reaction formula == * 1 CP...")
(Created page with "Category:reaction == Reaction RXN0-5100 == * ec-number: ** [http://enzyme.expasy.org/EC/5.99.1 ec-5.99.1] * direction: ** reversible * common-name: ** recombinase reca ==...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11501 ==
+
== Reaction RXN0-5100 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
+
** [http://enzyme.expasy.org/EC/5.99.1 ec-5.99.1]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** recombinase reca
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-170]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-D-GALACTOSE]][c] '''+''' 1 [[CPD-1099]][c]
+
* 1 [[DNA-Segment-Placeholder]][c] '''<=>''' 1 [[DNA-Segment-in-Reverse-Orientations]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10790]]
+
* Gene: [[FISUC_RS11935]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS13900]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6527]], stachyose degradation:
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-5.99.1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03634 R03634]
+
{{#set: direction=reversible}}
−
{{#set: ec-number=ec-3.2.1.22}}
+
{{#set: common-name=recombinase reca}}
−
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
−
{{#set: reconstruction source=add_expert_reactions}}
 

Revision as of 07:50, 17 October 2022

Reaction RXN0-5100

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • recombinase reca

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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