Difference between revisions of "PYRAMKIN-RXN"

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(Created page with "Category:reaction == Reaction GLUTAMATE-SYNTHASE-NADH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14] * direction: ** left-to-right == Reaction f...")
(Created page with "Category:reaction == Reaction RXN-12195 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15] * direction: ** left-to-right == Reaction formula == * 1 CT...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTAMATE-SYNTHASE-NADH-RXN ==
+
== Reaction RXN-12195 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.14 ec-1.4.1.14]
+
** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 2 [[GLT]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[CTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS02110]]
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUGLNSYN-PWY]], L-glutamate biosynthesis IV:
+
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6963]], ammonia assimilation cycle I:
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
−
** '''4''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: to improve flux of network
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13755 13755]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00093 R00093]
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** [http://www.genome.jp/dbget-bin/www_bget?R00569 R00569]
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* UNIPROT:
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{{#set: ec-number=ec-3.6.1.15}}
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** [http://www.uniprot.org/uniprot/Q9RXX2 Q9RXX2]
 
−
** [http://www.uniprot.org/uniprot/Q03460 Q03460]
 
−
** [http://www.uniprot.org/uniprot/Q22275 Q22275]
 
−
** [http://www.uniprot.org/uniprot/O61143 O61143]
 
−
** [http://www.uniprot.org/uniprot/Q9C102 Q9C102]
 
−
** [http://www.uniprot.org/uniprot/Q9P540 Q9P540]
 
−
{{#set: ec-number=ec-1.4.1.14}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction comment=to improve flux of network}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=add_expert_reactions}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 07:52, 17 October 2022

Reaction RXN-12195

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP:
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III:
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I:
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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