Difference between revisions of "FISUC RS12165"

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(Created page with "Category:gene == Gene FSU_RS05775 == * transcription-direction: ** negative * centisome-position: ** 36.111774 * left-end-position: ** 1387777 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS09545 == * common-name: ** lpxa * transcription-direction: ** positive * centisome-position: ** 59.98245 * left-end-position: ** 2305128 *...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS05775 ==
+
== Gene FSU_RS09545 ==
 +
* common-name:
 +
** lpxa
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 36.111774    
+
** 59.98245    
 
* left-end-position:
 
* left-end-position:
−
** 1387777
+
** 2305128
 
* right-end-position:
 
* right-end-position:
−
** 1389156
+
** 2305895
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[fsucgem]]
 
* [[fsucgem]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.7.13-RXN]]
+
* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[MANNPGUANYLTRANGDP-RXN]]
 
−
** Category: [[manual]]
 
−
*** source: [[add_expert_reactions]]; tool: [[unknown-tool]]; comment: added to improve flux in sugars
 
−
* [[MANNPISOM-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5659]]
+
* [[NAGLIPASYN-PWY]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-882]]
+
{{#set: common-name=lpxa}}
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-3881]]
+
{{#set: centisome-position=59.98245   }}
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=2305128}}
−
* [[PWY-7586]]
+
{{#set: right-end-position=2305895}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6992]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-3861]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[MANNCAT-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7456]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: centisome-position=36.111774   }}
 
−
{{#set: left-end-position=1387777}}
 
−
{{#set: right-end-position=1389156}}
 
 
{{#set: organism associated=fsucgem}}
 
{{#set: organism associated=fsucgem}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=1}}

Revision as of 07:56, 17 October 2022

Gene FSU_RS09545

  • common-name:
    • lpxa
  • transcription-direction:
    • positive
  • centisome-position:
    • 59.98245
  • left-end-position:
    • 2305128
  • right-end-position:
    • 2305895

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated





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