Difference between revisions of "GLUTKIN-RXN"

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(Created page with "Category:reaction == Reaction GSAAMINOTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8] * direction: ** left-to-right * common-name: ** glutama...")
(Created page with "Category:reaction == Reaction GLUTKIN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2.7.2.11] * direction: ** left-to-right * common-name: ** glutamate 5...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GSAAMINOTRANS-RXN ==
+
== Reaction GLUTKIN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.3.8 ec-5.4.3.8]
+
** [http://enzyme.expasy.org/EC/2.7.2.11 ec-2.7.2.11]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate-1-semialdehyde 2,1-aminomutase
+
** glutamate 5-kinase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLUTAMATE-1-SEMIALDEHYDE]][c] '''=>''' 1 [[5-AMINO-LEVULINATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS15225]]
+
* Gene: [[FSU_RS02840]]
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS01415]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS00960]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
+
* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3341]], L-proline biosynthesis III:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PROSYN-PWY]], L-proline biosynthesis I:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14265 14265]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14878 14878]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02272 R02272]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00239 R00239]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P18492 P18492]
+
** [http://www.uniprot.org/uniprot/Q9PJ29 Q9PJ29]
−
** [http://www.uniprot.org/uniprot/P21267 P21267]
+
** [http://www.uniprot.org/uniprot/Q9CF72 Q9CF72]
−
** [http://www.uniprot.org/uniprot/Q06741 Q06741]
+
** [http://www.uniprot.org/uniprot/Q9JUK7 Q9JUK7]
−
** [http://www.uniprot.org/uniprot/Q06774 Q06774]
+
** [http://www.uniprot.org/uniprot/P43763 P43763]
−
** [http://www.uniprot.org/uniprot/P23893 P23893]
+
** [http://www.uniprot.org/uniprot/P0A7B5 P0A7B5]
−
** [http://www.uniprot.org/uniprot/O26330 O26330]
+
** [http://www.uniprot.org/uniprot/P17856 P17856]
−
** [http://www.uniprot.org/uniprot/P30949 P30949]
+
** [http://www.uniprot.org/uniprot/P32264 P32264]
−
** [http://www.uniprot.org/uniprot/Q9PP70 Q9PP70]
+
** [http://www.uniprot.org/uniprot/P73071 P73071]
−
** [http://www.uniprot.org/uniprot/Q9JW10 Q9JW10]
+
** [http://www.uniprot.org/uniprot/O04226 O04226]
−
** [http://www.uniprot.org/uniprot/O29027 O29027]
+
** [http://www.uniprot.org/uniprot/O13810 O13810]
−
** [http://www.uniprot.org/uniprot/P45621 P45621]
+
** [http://www.uniprot.org/uniprot/P46546 P46546]
−
** [http://www.uniprot.org/uniprot/P24630 P24630]
+
{{#set: ec-number=ec-2.7.2.11}}
−
** [http://www.uniprot.org/uniprot/P31593 P31593]
 
−
** [http://www.uniprot.org/uniprot/Q39566 Q39566]
 
−
** [http://www.uniprot.org/uniprot/P48247 P48247]
 
−
** [http://www.uniprot.org/uniprot/P46716 P46716]
 
−
** [http://www.uniprot.org/uniprot/Q40147 Q40147]
 
−
** [http://www.uniprot.org/uniprot/O74061 O74061]
 
−
</div>
 
−
{{#set: ec-number=ec-5.4.3.8}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=glutamate-1-semialdehyde 2,1-aminomutase}}
+
{{#set: common-name=glutamate 5-kinase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
{{#set: reconstruction source=ecoli|plantarum|bifidobacterium|bthetaiotaomicron|fibrobacter_succinogenes2|faecalibacterium|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction GLUTKIN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • glutamate 5-kinase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CITRULBIO-PWY, L-citrulline biosynthesis:
    • 8 reactions found over 8 reactions in the full pathway
  • ARGININE-SYN4-PWY, L-ornithine biosynthesis II:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6922, L-Nδ-acetylornithine biosynthesis:
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3341, L-proline biosynthesis III:
    • 5 reactions found over 5 reactions in the full pathway
  • PROSYN-PWY, L-proline biosynthesis I:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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