Difference between revisions of "RXN-19728"

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(Created page with "Category:reaction == Reaction GALPMUT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.9 ec-5.4.99.9] * direction: ** reversible * common-name: ** udp-galactopyr...")
(Created page with "Category:reaction == Reaction RXN-19728 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.1.96 ec-3.1.1.96] * direction: ** left-to-right * common-name: ** d-tyrosyl-trn...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GALPMUT-RXN ==
+
== Reaction RXN-19728 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.99.9 ec-5.4.99.9]
+
** [http://enzyme.expasy.org/EC/3.1.1.96 ec-3.1.1.96]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** udp-galactopyranose mutase
+
** d-tyrosyl-trna(tyr) deacylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-14553]][c] '''<=>''' 1 [[UDP-D-GALACTO-14-FURANOSE]][c]
+
* 1 [[D-aspartyl-tRNA-Asp]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ASP-tRNAs]][c] '''+''' 1 [[CPD-302]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS04975]]
+
* Gene: [[FSU_RS04810]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS02920]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS06865]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis:
 
−
** '''2''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis:
 
−
** '''5''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7622]], UDP-&alpha;-D-galactofuranose biosynthesis:
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
* [[OANTIGEN-PWY]], O-antigen building blocks biosynthesis (E. coli):
 
−
** '''3''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-3.1.1.96}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24135 24135]
+
{{#set: direction=left-to-right}}
−
* LIGAND-RXN:
+
{{#set: common-name=d-tyrosyl-trna(tyr) deacylase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00505 R00505]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PML8 Q9PML8]
 
−
{{#set: ec-number=ec-5.4.99.9}}
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=udp-galactopyranose mutase}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=0}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
 
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction RXN-19728

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • d-tyrosyl-trna(tyr) deacylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-19728&oldid=92006"