Difference between revisions of "O-SUCCINYLBENZOATE-COA-LIG-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction THREONINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3] * direction: ** left-to-right * common-name: *...")
(Created page with "Category:reaction == Reaction O-SUCCINYLBENZOATE-COA-LIG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.26 ec-6.2.1.26] * direction: ** left-to-right == Reactio...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction THREONINE--TRNA-LIGASE-RXN ==
+
== Reaction O-SUCCINYLBENZOATE-COA-LIG-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.3 ec-6.1.1.3]
+
** [http://enzyme.expasy.org/EC/6.2.1.26 ec-6.2.1.26]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** threonine--trna ligase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYLBENZOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-6972]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS12440]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS10475]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[PWY-5837]], 2-carboxy-1,4-naphthoquinol biosynthesis:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24625 24625]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17010 17010]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04030 R04030]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O83809 O83809]
+
** [http://www.uniprot.org/uniprot/P37353 P37353]
−
** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
+
** [http://www.uniprot.org/uniprot/P23971 P23971]
−
** [http://www.uniprot.org/uniprot/P56071 P56071]
+
** [http://www.uniprot.org/uniprot/Q9CHK3 Q9CHK3]
−
** [http://www.uniprot.org/uniprot/O58430 O58430]
+
** [http://www.uniprot.org/uniprot/Q55182 Q55182]
−
** [http://www.uniprot.org/uniprot/P47615 P47615]
+
{{#set: ec-number=ec-6.2.1.26}}
−
** [http://www.uniprot.org/uniprot/O05947 O05947]
 
−
** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
 
−
** [http://www.uniprot.org/uniprot/O67583 O67583]
 
−
** [http://www.uniprot.org/uniprot/O27504 O27504]
 
−
** [http://www.uniprot.org/uniprot/O51662 O51662]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
 
−
** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
 
−
** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
 
−
** [http://www.uniprot.org/uniprot/P43014 P43014]
 
−
** [http://www.uniprot.org/uniprot/P46244 P46244]
 
−
** [http://www.uniprot.org/uniprot/P75225 P75225]
 
−
** [http://www.uniprot.org/uniprot/Q48989 Q48989]
 
−
** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
 
−
** [http://www.uniprot.org/uniprot/O04630 O04630]
 
−
** [http://www.uniprot.org/uniprot/P18255 P18255]
 
−
** [http://www.uniprot.org/uniprot/P18256 P18256]
 
−
** [http://www.uniprot.org/uniprot/P04801 P04801]
 
−
** [http://www.uniprot.org/uniprot/P07236 P07236]
 
−
** [http://www.uniprot.org/uniprot/P26639 P26639]
 
−
</div>
 
−
{{#set: ec-number=ec-6.1.1.3}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=threonine--trna ligase}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}

Latest revision as of 11:15, 17 October 2022

Reaction O-SUCCINYLBENZOATE-COA-LIG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5837, 2-carboxy-1,4-naphthoquinol biosynthesis:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=O-SUCCINYLBENZOATE-COA-LIG-RXN&oldid=92052"