Difference between revisions of "RXN-7607"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite CPD0-1162 == * common-name: ** (2e,5z)-tetradecenoyl-coa * inchi-key: ** jvefyxpcqbmmaa-zmlwrgbosa-j * molecular-weight: ** 969.83 * smil...")
(Created page with "Category:reaction == Reaction RXN-7607 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99] ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] * directio...")
 
(8 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:reaction]]
−
== Metabolite CPD0-1162 ==
+
== Reaction RXN-7607 ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99]
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 +
* direction:
 +
** left-to-right
 
* common-name:
 
* common-name:
−
** (2e,5z)-tetradecenoyl-coa
+
** 5'/3'-nucleotidase sure
−
* inchi-key:
+
** bifunctional metallophosphatase/5'-nucleotidase
−
** jvefyxpcqbmmaa-zmlwrgbosa-j
+
== Reaction formula ==
−
* molecular-weight:
+
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c]
−
** 969.83
+
== Gene(s) associated with this reaction  ==
−
* smiles:
+
* Gene: [[FSU_RS00535]]
−
** ccccccccc=ccc=cc(sccnc(=o)ccnc(=o)[c@h](o)c(c)(c)cop(=o)(op(=o)(oc[c@h]1([c@@h](op([o-])(=o)[o-])[c@@h](o)[c@@h](o1)n2(c3(n=cn=c(c(n=c2)=3)n))))[o-])[o-])=o
+
** Category: [[annotation]]
−
== Reaction(s) known to consume the compound ==
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
== Reaction(s) known to produce the compound ==
+
** Category: [[orthology]]
−
* [[RXN-17783]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
== Reaction(s) of unknown directionality ==
+
* Gene: [[FSU_RS03695]]
−
{{#set: common-name=(2e,5z)-tetradecenoyl-coa}}
+
** Category: [[annotation]]
−
{{#set: inchi-key=inchikey=jvefyxpcqbmmaa-zmlwrgbosa-j}}
+
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
{{#set: molecular-weight=969.83}}
+
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS01815]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14345]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
== Pathway(s)  ==
 +
* [[PWY-6596]], adenosine nucleotides degradation I:
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27719 27719]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01126 R01126]
 +
{{#set: ec-number=ec-3.1.3.99|ec-3.1.3.5}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=5'/3'-nucleotidase sure|bifunctional metallophosphatase/5'-nucleotidase}}
 +
{{#set: nb gene associated=4}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction RXN-7607

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 5'/3'-nucleotidase sure
    • bifunctional metallophosphatase/5'-nucleotidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6596, adenosine nucleotides degradation I:
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-7607&oldid=92079"