Difference between revisions of "RXN-7607"
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(Created page with "Category:reaction == Reaction 3.6.3.35-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/7.2.2.5 ec-7.2.2.5] * direction: ** left-to-right == Reaction formula == * 1 A...") |
(Created page with "Category:reaction == Reaction RXN-7607 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99] ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] * directio...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-7607 == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99] |
| + | ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** 5'/3'-nucleotidase sure | ||
| + | ** bifunctional metallophosphatase/5'-nucleotidase | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS00535]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** Source: [[ | + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[FSU_RS03695]] |
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** Source: [[ | + | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a |
| + | * Gene: [[FISUC_RS01815]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[FISUC_RS14345]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6596]], adenosine nucleotides degradation I: | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[orthology]]; source: [[ | + | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
| + | * category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27719 27719] |
| − | {{#set: ec-number=ec- | + | * LIGAND-RXN: |
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01126 R01126] | ||
| + | {{#set: ec-number=ec-3.1.3.99|ec-3.1.3.5}} | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: nb gene associated= | + | {{#set: common-name=5'/3'-nucleotidase sure|bifunctional metallophosphatase/5'-nucleotidase}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=4}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction tool=orthofinder}} | + | {{#set: reconstruction category=orthology|annotation}} |
| + | {{#set: reconstruction tool=orthofinder|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}} |
Latest revision as of 11:15, 17 October 2022
Contents
Reaction RXN-7607
- ec-number:
- direction:
- left-to-right
- common-name:
- 5'/3'-nucleotidase sure
- bifunctional metallophosphatase/5'-nucleotidase
Reaction formula
Gene(s) associated with this reaction
- Gene: FSU_RS00535
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FSU_RS03695
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FISUC_RS01815
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS14345
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6596, adenosine nucleotides degradation I:
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
External links
