Difference between revisions of "RXN-7607"

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(Created page with "Category:reaction == Reaction DEOXYADENOSINE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.74 ec-2.7.1.74] ** [http://enzyme.expasy.org/EC/2.7.1.76 ec-2...")
(Created page with "Category:reaction == Reaction RXN-7607 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99] ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] * directio...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DEOXYADENOSINE-KINASE-RXN ==
+
== Reaction RXN-7607 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.74 ec-2.7.1.74]
+
** [http://enzyme.expasy.org/EC/3.1.3.99 ec-3.1.3.99]
−
** [http://enzyme.expasy.org/EC/2.7.1.76 ec-2.7.1.76]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
−
** [http://enzyme.expasy.org/EC/2.7.1.145 ec-2.7.1.145]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** deoxynucleoside kinase
+
** 5'/3'-nucleotidase sure
 +
** bifunctional metallophosphatase/5'-nucleotidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[DEOXYADENOSINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DAMP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS14200]]
+
* Gene: [[FSU_RS00535]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS12230]]
+
* Gene: [[FSU_RS03695]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FISUC_RS01815]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14345]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7224]], purine deoxyribonucleosides salvage:
+
* [[PWY-6596]], adenosine nucleotides degradation I:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23453 23453]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27719 27719]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02089 R02089]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01126 R01126]
−
* UNIPROT:
+
{{#set: ec-number=ec-3.1.3.99|ec-3.1.3.5}}
−
** [http://www.uniprot.org/uniprot/Q7M0X4 Q7M0X4]
 
−
** [http://www.uniprot.org/uniprot/Q59483 Q59483]
 
−
{{#set: ec-number=ec-2.7.1.145|ec-2.7.1.76|ec-2.7.1.74}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=deoxynucleoside kinase}}
+
{{#set: common-name=5'/3'-nucleotidase sure|bifunctional metallophosphatase/5'-nucleotidase}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=4}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=plantarum|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}
+
{{#set: reconstruction source=ecoli|fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Latest revision as of 11:15, 17 October 2022

Reaction RXN-7607

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 5'/3'-nucleotidase sure
    • bifunctional metallophosphatase/5'-nucleotidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6596, adenosine nucleotides degradation I:
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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