Difference between revisions of "RXN-12345"

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(Created page with "Category:metabolite == Metabolite C6 == * common-name: ** ditrans,octacis-undecaprenyldiphospho-[(n-acetyl-β-d-glucosaminyl)-(1,4)-]-n-acetyl-α-d-muramoyl-l-ala...")
(Created page with "Category:reaction == Reaction RXN-12345 == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.151 ec-4.2.1.151] * direction: ** left-to-right == Reaction formula == * 1 ...")
 
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[[Category:metabolite]]
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[[Category:reaction]]
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== Metabolite C6 ==
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== Reaction RXN-12345 ==
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* common-name:
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* ec-number:
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** ditrans,octacis-undecaprenyldiphospho-[(n-acetyl-β-d-glucosaminyl)-(1,4)-]-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine
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** [http://enzyme.expasy.org/EC/4.2.1.151 ec-4.2.1.151]
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* inchi-key:
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* direction:
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** oxjnzxdfvldlei-brnovcdwsa-j
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** left-to-right
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* molecular-weight:
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== Reaction formula ==
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** 1916.23
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* 1 [[CHORISMATE]][c] '''=>''' 1 [[CPD-16467]][c] '''+''' 1 [[WATER]][c]
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* smiles:
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== Gene(s) associated with this reaction  ==
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** cc(c)=cccc(/c)=c/ccc(/c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/ccc(\c)=c/cop([o-])(=o)op([o-])(=o)o[c@h]2([c@h](nc(=o)c)[c@@h](o[c@h](c)c(=o)n[c@@h](c)c(=o)n[c@@h](c(=o)[o-])ccc(=o)n[c@@h](ccc[c@h]([n+])c([o-])=o)c(n[c@h](c)c(=o)n[c@h](c)c([o-])=o)=o)[c@h](o[c@h]1(o[c@h](co)[c@@h](o)[c@h](o)[c@@h](nc(c)=o)1))[c@@h](co)o2)
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== Pathway(s) ==
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== Reaction(s) known to consume the compound ==
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* [[PWY-7371]], 1,4-dihydroxy-6-naphthoate biosynthesis II:
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* [[2.4.1.129-RXN]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[NACGLCTRANS-RXN]]
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* [[PWY-7374]], 1,4-dihydroxy-6-naphthoate biosynthesis I:
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* [[RXN-16650]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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== Reconstruction information  ==
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* [[2.4.1.129-RXN]]
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_spontaneous]]; tool: [[meneco]]; comment: added for gapfilling
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* [[NACGLCTRANS-RXN]]
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== External links  ==
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== Reaction(s) of unknown directionality ==
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* LIGAND-RXN:
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{{#set: common-name=ditrans,octacis-undecaprenyldiphospho-[(n-acetyl-β-d-glucosaminyl)-(1,4)-]-n-acetyl-α-d-muramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10667 R10667]
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{{#set: inchi-key=inchikey=oxjnzxdfvldlei-brnovcdwsa-j}}
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* RHEA:
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{{#set: molecular-weight=1916.23}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33075 33075]
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{{#set: ec-number=ec-4.2.1.151}}
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{{#set: direction=left-to-right}}
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{{#set: nb gene associated=0}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_spontaneous}}

Latest revision as of 11:16, 17 October 2022

Reaction RXN-12345

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7371, 1,4-dihydroxy-6-naphthoate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7374, 1,4-dihydroxy-6-naphthoate biosynthesis I:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN-12345&oldid=92540"