Difference between revisions of "RXN-11479"
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(Created page with "Category:reaction == Reaction 2.7.13.3-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.13.3 ec-2.7.13.3] * direction: ** left-to-right * common-name: ** histidine...") |
(Created page with "Category:reaction == Reaction RXN-11479 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179] ** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41] * dir...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-11479 == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179] |
| + | ** [http://enzyme.expasy.org/EC/2.3.1.41 ec-2.3.1.41] | ||
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** beta-ketoacyl-acp synthase ii |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[FSU_RS01605]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[ | + | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[FISUC_RS15210]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
| + | * Gene: [[FISUC_RS15410]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | * Gene: [[FSU_RS01400]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: | ||
| + | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: ec-number=ec-2. | + | {{#set: ec-number=ec-2.3.1.41|ec-2.3.1.179}} |
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=beta-ketoacyl-acp synthase ii}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}} | {{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}} | ||
Latest revision as of 11:16, 17 October 2022
Contents
Reaction RXN-11479
- ec-number:
- direction:
- left-to-right
- common-name:
- beta-ketoacyl-acp synthase ii
Reaction formula
- 1 Glutaryl-ACP-methyl-esters[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] => 1 3-Ketopimeloyl-ACP-methyl-esters[c] + 1 ACP[c] + 1 CARBON-DIOXIDE[c]
Gene(s) associated with this reaction
- Gene: FSU_RS01605
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS15210
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS15410
- Category: annotation
- Source: fibrobacter_succinogenes2, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FSU_RS01400
- Category: annotation
- Source: fibrobacter_succinogenes1, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6519, 8-amino-7-oxononanoate biosynthesis I:
- 11 reactions found over 11 reactions in the full pathway
Reconstruction information
- category: annotation; source: fibrobacter_succinogenes1; tool: pathwaytools; comment: n.a
- category: annotation; source: fibrobacter_succinogenes2; tool: pathwaytools; comment: n.a
