Difference between revisions of "RXN66-472"

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(Created page with "Category:reaction == Reaction 6PFRUCTPHOS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.11 ec-2.7.1.11] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN66-472 == * common-name: ** fatty aldehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: **...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 6PFRUCTPHOS-RXN ==
+
== Reaction RXN66-472 ==
 +
* common-name:
 +
** fatty aldehyde dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.11 ec-2.7.1.11]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2-Me-Branched-234-Sat-FALD]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[Fisuc_1887]]
+
* Gene: [[FSU_RS01755]]
 
** Category: [[manual]]
 
** Category: [[manual]]
−
*** Source: [[reactions_add_ibrahim_10032021]], Tool: [[unknown-tool]], Assignment: n.a, Comment: to improve network
+
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
+
* [[PWY66-387]], fatty acid α-oxidation II:
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** '''11''' reactions found over '''12''' reactions in the full pathway
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** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
 
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** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 
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** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1042]], glycolysis IV (plant cytosol):
 
−
** '''8''' reactions found over '''10''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_ibrahim_10032021]]; tool: [[curation]]; comment: added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: common-name=fatty aldehyde dehydrogenase}}
−
* RHEA:
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{{#set: ec-number=ec-1.2.1.3}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16110 16110]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00756 R00756]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7M3F7 Q7M3F7]
 
−
** [http://www.uniprot.org/uniprot/Q7M4J2 Q7M4J2]
 
−
** [http://www.uniprot.org/uniprot/P12382 P12382]
 
−
** [http://www.uniprot.org/uniprot/Q27665 Q27665]
 
−
** [http://www.uniprot.org/uniprot/P52034 P52034]
 
−
** [http://www.uniprot.org/uniprot/Q7M4K9 Q7M4K9]
 
−
** [http://www.uniprot.org/uniprot/P43863 P43863]
 
−
** [http://www.uniprot.org/uniprot/P20275 P20275]
 
−
** [http://www.uniprot.org/uniprot/P47457 P47457]
 
−
** [http://www.uniprot.org/uniprot/Q01813 Q01813]
 
−
** [http://www.uniprot.org/uniprot/Q07636 Q07636]
 
−
** [http://www.uniprot.org/uniprot/P16861 P16861]
 
−
** [http://www.uniprot.org/uniprot/P16862 P16862]
 
−
** [http://www.uniprot.org/uniprot/P00512 P00512]
 
−
** [http://www.uniprot.org/uniprot/P0A796 P0A796]
 
−
** [http://www.uniprot.org/uniprot/P06999 P06999]
 
−
** [http://www.uniprot.org/uniprot/P08237 P08237]
 
−
** [http://www.uniprot.org/uniprot/P00511 P00511]
 
−
** [http://www.uniprot.org/uniprot/P70927 P70927]
 
−
** [http://www.uniprot.org/uniprot/Q7M3F5 Q7M3F5]
 
−
** [http://www.uniprot.org/uniprot/Q9TWY0 Q9TWY0]
 
−
** [http://www.uniprot.org/uniprot/P30835 P30835]
 
−
** [http://www.uniprot.org/uniprot/Q03215 Q03215]
 
−
** [http://www.uniprot.org/uniprot/Q03216 Q03216]
 
−
** [http://www.uniprot.org/uniprot/P80019 P80019]
 
−
** [http://www.uniprot.org/uniprot/Q59214 Q59214]
 
−
** [http://www.uniprot.org/uniprot/Q27705 Q27705]
 
−
** [http://www.uniprot.org/uniprot/P75476 P75476]
 
−
** [http://www.uniprot.org/uniprot/P72830 P72830]
 
−
** [http://www.uniprot.org/uniprot/Q55988 Q55988]
 
−
** [http://www.uniprot.org/uniprot/Q49084 Q49084]
 
−
** [http://www.uniprot.org/uniprot/O08333 O08333]
 
−
</div>
 
−
{{#set: ec-number=ec-2.7.1.11}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=added from the nc_017448.1 f. succinogenes s85 genome scale metabolic model.}}
+
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
−
{{#set: reconstruction source=reactions_add_ibrahim_10032021}}
+
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:17, 17 October 2022

Reaction RXN66-472

  • common-name:
    • fatty aldehyde dehydrogenase
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-387, fatty acid α-oxidation II:
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN66-472&oldid=92687"