Difference between revisions of "GUANOSINE-5DP-3DP"
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(Created page with "Category:gene == Gene FSU_RS07105 == * common-name: ** pflb * transcription-direction: ** positive * centisome-position: ** 45.120667 * left-end-position: ** 1733989 *...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene FSU_RS07105 == |
| + | * common-name: | ||
| + | ** pflb | ||
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 45.120667 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 1733989 |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 1736244 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[ | + | * [[fibrobacter_24072020]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[KETOBUTFORMLY-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * [[PYRUVFORMLY-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
| + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5437]] |
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-5485]] |
| − | ** '''4''' reactions found over ''' | + | ** '''4''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5480]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-5493]] |
| − | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY4LZ-257]] |
| − | {{#set: centisome-position= | + | ** '''9''' reactions found over '''7''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[FERMENTATION-PWY]] |
| − | {{#set: right-end-position= | + | ** '''14''' reactions found over '''16''' reactions in the full pathway |
| − | {{#set: organism associated= | + | {{#set: common-name=pflb}} |
| − | {{#set: nb reaction associated= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: nb pathway associated= | + | {{#set: centisome-position=45.120667 }} |
| + | {{#set: left-end-position=1733989}} | ||
| + | {{#set: right-end-position=1736244}} | ||
| + | {{#set: organism associated=fibrobacter_24072020}} | ||
| + | {{#set: nb reaction associated=2}} | ||
| + | {{#set: nb pathway associated=6}} | ||
Revision as of 21:46, 24 July 2020
Contents
Gene FSU_RS07105
- common-name:
- pflb
- transcription-direction:
- positive
- centisome-position:
- 45.120667
- left-end-position:
- 1733989
- right-end-position:
- 1736244
Organism(s) associated with this gene
Reaction(s) associated
- KETOBUTFORMLY-RXN
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- Category: orthology
- PYRUVFORMLY-RXN
- Category: annotation
- source: genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-5437
- 3 reactions found over 6 reactions in the full pathway
- PWY-5485
- 4 reactions found over 3 reactions in the full pathway
- PWY-5480
- 3 reactions found over 3 reactions in the full pathway
- PWY-5493
- 2 reactions found over 2 reactions in the full pathway
- PWY4LZ-257
- 9 reactions found over 7 reactions in the full pathway
- FERMENTATION-PWY
- 14 reactions found over 16 reactions in the full pathway
