Difference between revisions of "GARTRANSFORMYL2-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE == * common-name: ** 5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate * inchi-key: ** xfvulmd...")
(Created page with "Category:reaction == Reaction GARTRANSFORMYL2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2] * direction: ** left-to-right == Reaction formula == * 1...")
 
(12 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:reaction]]
−
== Metabolite PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE ==
+
== Reaction GARTRANSFORMYL2-RXN ==
−
* common-name:
+
* ec-number:
−
** 5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate
+
** [http://enzyme.expasy.org/EC/2.1.2 ec-2.1.2]
−
* inchi-key:
+
* direction:
−
** xfvulmdjzxymsg-ziyngmlesa-k
+
** left-to-right
−
* molecular-weight:
+
== Reaction formula ==
−
** 336.174
+
* 1 [[5-PHOSPHO-RIBOSYL-GLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''=>''' 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
−
* smiles:
+
== Gene(s) associated with this reaction  ==
−
** c(op([o-])([o-])=o)[c@h]2([c@@h](o)[c@@h](o)[c@h](n1(c=nc(\c([o-])=o)=c(n)/1))o2)
+
* Gene: [[FSU_RS04650]]
−
== Reaction(s) known to consume the compound ==
+
** Category: [[orthology]]
−
* [[AIRCARBOXY-RXN]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* [[SAICARSYN-RXN]]
+
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
== Reaction(s) known to produce the compound ==
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* [[AIRCARBOXY-RXN]]
+
== Pathway(s) ==
−
* [[RXN0-743]]
+
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
−
== Reaction(s) of unknown directionality ==
+
** '''7''' reactions found over '''5''' reactions in the full pathway
−
{{#set: common-name=5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate}}
+
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
−
{{#set: inchi-key=inchikey=xfvulmdjzxymsg-ziyngmlesa-k}}
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
{{#set: molecular-weight=336.174}}
+
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24830 24830]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06974 R06974]
 +
{{#set: ec-number=ec-2.1.2}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=orthofinder}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=bifidobacterium|ecoli|bthetaiotaomicron}}

Latest revision as of 11:17, 17 October 2022

Reaction GARTRANSFORMYL2-RXN

  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
    • 7 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=GARTRANSFORMYL2-RXN&oldid=92839"