Difference between revisions of "1.2.1.13-RXN"

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(Created page with "Category:reaction == Reaction HOLO-ACP-SYNTH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.8.7 ec-2.7.8.7] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction 1.2.1.13-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.13 ec-1.2.1.13] * direction: ** left-to-right == Reaction formula == * 1 [...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOLO-ACP-SYNTH-RXN ==
+
== Reaction 1.2.1.13-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.8.7 ec-2.7.8.7]
+
** [http://enzyme.expasy.org/EC/1.2.1.13 ec-1.2.1.13]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[All-apo-ACPs]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[All-holo-ACPs]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[DPG]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GAP]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS12460]]
 
−
** Category: [[manual]]
 
−
*** Source: [[add_expert_reactions]], Tool: [[unknown-tool]], Assignment: n.a, Comment: added to improve flux in sugars
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6012]], acyl carrier protein metabolism:
+
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle:
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''11''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6012-1]], acyl carrier protein activation:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: present in the annotation part in the first version of the fibrobacter gem
+
* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: added to improve flux in sugars
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12069 12069]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10298 10298]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01625 R01625]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01063 R01063]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PMP8 Q9PMP8]
+
** [http://www.uniprot.org/uniprot/P09672 P09672]
−
** [http://www.uniprot.org/uniprot/P24224 P24224]
+
** [http://www.uniprot.org/uniprot/P09094 P09094]
−
** [http://www.uniprot.org/uniprot/O84102 O84102]
+
** [http://www.uniprot.org/uniprot/P12858 P12858]
−
** [http://www.uniprot.org/uniprot/Q9RQW2 Q9RQW2]
+
** [http://www.uniprot.org/uniprot/P12859 P12859]
−
** [http://www.uniprot.org/uniprot/O83800 O83800]
+
** [http://www.uniprot.org/uniprot/P12860 P12860]
−
** [http://www.uniprot.org/uniprot/Q9ZCX5 Q9ZCX5]
+
** [http://www.uniprot.org/uniprot/P09315 P09315]
−
** [http://www.uniprot.org/uniprot/Q9ZL36 Q9ZL36]
+
** [http://www.uniprot.org/uniprot/P25856 P25856]
−
** [http://www.uniprot.org/uniprot/O25488 O25488]
+
** [http://www.uniprot.org/uniprot/Q7M1R8 Q7M1R8]
−
** [http://www.uniprot.org/uniprot/P96618 P96618]
+
** [http://www.uniprot.org/uniprot/Q7M1R7 Q7M1R7]
−
** [http://www.uniprot.org/uniprot/O66995 O66995]
+
** [http://www.uniprot.org/uniprot/Q37174 Q37174]
−
** [http://www.uniprot.org/uniprot/P0A4W8 P0A4W8]
+
** [http://www.uniprot.org/uniprot/P30724 P30724]
−
{{#set: ec-number=ec-2.7.8.7}}
+
** [http://www.uniprot.org/uniprot/P80505 P80505]
 +
** [http://www.uniprot.org/uniprot/Q55245 Q55245]
 +
** [http://www.uniprot.org/uniprot/O22534 O22534]
 +
** [http://www.uniprot.org/uniprot/P50362 P50362]
 +
** [http://www.uniprot.org/uniprot/P19866 P19866]
 +
** [http://www.uniprot.org/uniprot/Q41019 Q41019]
 +
</div>
 +
{{#set: ec-number=ec-1.2.1.13}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=present in the annotation part in the first version of the fibrobacter gem}}
+
{{#set: reconstruction comment=added to improve flux in sugars}}
 
{{#set: reconstruction source=add_expert_reactions}}
 
{{#set: reconstruction source=add_expert_reactions}}

Latest revision as of 11:17, 17 October 2022

Reaction 1.2.1.13-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • CALVIN-PWY, Calvin-Benson-Bassham cycle:
    • 11 reactions found over 13 reactions in the full pathway

Reconstruction information

External links





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