Difference between revisions of "FISUC RS15575"

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(Created page with "Category:reaction == Reaction PHOSPHOGLUCMUT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2] * direction: ** reversible == Reaction formula == * 1...")
(Created page with "Category:gene == Gene FISUC_RS15575 == * common-name: ** glgb * transcription-direction: ** positive * centisome-position: ** 99.31625 * left-end-position: ** 3816361...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction PHOSPHOGLUCMUT-RXN ==
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== Gene FISUC_RS15575 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/5.4.2.2 ec-5.4.2.2]
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** glgb
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* direction:
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* transcription-direction:
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** reversible
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** positive
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== Reaction formula ==
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* centisome-position:
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* 1 [[GLC-1-P]][c] '''<=>''' 1 [[D-glucopyranose-6-phosphate]][c]
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** 99.31625   
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== Gene(s) associated with this reaction ==
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* left-end-position:
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== Pathway(s) ==
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** 3816361
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* right-end-position:
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* [[PWY-7238]], sucrose biosynthesis II:
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** 3818577
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Organism(s) associated with this gene ==
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* [[PWY-7343]], UDP-&alpha;-D-glucose biosynthesis I:
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* [[fsucgem]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reaction(s) associated ==
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* [[PWY-7902]], glucosylglycerol biosynthesis:
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* [[GLYCOGEN-BRANCH-RXN]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate):
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[RXN-14371]]
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* [[PWY-5941]], glycogen degradation II:
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** Category: [[annotation]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
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* [[RXN-14372]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-18777]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7669]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7710]]
 +
** Category: [[annotation]]
 +
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[GLYCOGENSYNTH-PWY]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway):
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* [[PWY-622]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-622]], starch biosynthesis:
 
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway):
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* [[PWY-7900]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[GLYCOCAT-PWY]], glycogen degradation I:
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* [[PWY-5067]]
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** '''7''' reactions found over '''8''' reactions in the full pathway
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3801]], sucrose degradation II (sucrose synthase):
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{{#set: common-name=glgb}}
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** '''3''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY-5384]], sucrose degradation IV (sucrose phosphorylase):
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{{#set: centisome-position=99.31625    }}
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: left-end-position=3816361}}
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* [[PWY-2723]], trehalose degradation V:
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{{#set: right-end-position=3818577}}
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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* [[PWY-5661]], GDP-glucose biosynthesis:
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{{#set: nb reaction associated=6}}
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: nb pathway associated=4}}
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* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation:
 
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** '''3''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY-6737]], starch degradation V:
 
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** '''3''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-6731]], starch degradation III:
 
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** '''2''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY-6981]], chitin biosynthesis:
 
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** '''4''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-5940]], streptomycin biosynthesis:
 
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** '''2''' reactions found over '''18''' reactions in the full pathway
 
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</div>
 
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== Reconstruction information  ==
 
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* category: [[manual]]; source: [[reaction_add_fba_test1]]; tool: [[curation]]; comment: added to improve flux
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23539 23539]
 
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* PIR:
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41801 A41801]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A53614 A53614]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B53614 B53614]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=E70650 E70650]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G64803 G64803]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=G81947 G81947]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I39487 I39487]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I41215 I41215]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRB PMRB]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRBI PMRBI]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=PMRT PMRT]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S10741 S10741]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39397 S39397]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41199 S41199]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S41200 S41200]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S76847 S76847]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S78440 S78440]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04326 T04326]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04327 T04327]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T12574 T12574]
 
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** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52656 T52656]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P36871 P36871]
 
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** [http://www.uniprot.org/uniprot/P40390 P40390]
 
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** [http://www.uniprot.org/uniprot/P40391 P40391]
 
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** [http://www.uniprot.org/uniprot/P95090 P95090]
 
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** [http://www.uniprot.org/uniprot/P36938 P36938]
 
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** [http://www.uniprot.org/uniprot/P57002 P57002]
 
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** [http://www.uniprot.org/uniprot/P38569 P38569]
 
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** [http://www.uniprot.org/uniprot/P31120 P31120]
 
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** [http://www.uniprot.org/uniprot/P00949 P00949]
 
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** [http://www.uniprot.org/uniprot/P38652 P38652]
 
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** [http://www.uniprot.org/uniprot/Q7M2K5 Q7M2K5]
 
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** [http://www.uniprot.org/uniprot/Q16106 Q16106]
 
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** [http://www.uniprot.org/uniprot/P33401 P33401]
 
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** [http://www.uniprot.org/uniprot/P37012 P37012]
 
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** [http://www.uniprot.org/uniprot/P74643 P74643]
 
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** [http://www.uniprot.org/uniprot/Q51847 Q51847]
 
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** [http://www.uniprot.org/uniprot/P93804 P93804]
 
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** [http://www.uniprot.org/uniprot/P93805 P93805]
 
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** [http://www.uniprot.org/uniprot/P93262 P93262]
 
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** [http://www.uniprot.org/uniprot/Q9SCY0 Q9SCY0]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00959 R00959]
 
−
</div>
 
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{{#set: ec-number=ec-5.4.2.2}}
 
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{{#set: direction=reversible}}
 
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{{#set: nb gene associated=0}}
 
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{{#set: nb pathway associated=19}}
 
−
{{#set: reconstruction category=manual}}
 
−
{{#set: reconstruction tool=curation}}
 
−
{{#set: reconstruction comment=added to improve flux}}
 
−
{{#set: reconstruction source=reaction_add_fba_test1}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS15575

  • common-name:
    • glgb
  • transcription-direction:
    • positive
  • centisome-position:
    • 99.31625
  • left-end-position:
    • 3816361
  • right-end-position:
    • 3818577

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOGENSYNTH-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-622
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5067
    • 1 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15575&oldid=93641"