Difference between revisions of "FISUC RS15575"

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(Created page with "Category:reaction == Reaction ADENOSYLHOMOCYSTEINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1] * direction: ** left-to-right * common-name: *...")
 
(Created page with "Category:gene == Gene FISUC_RS15575 == * common-name: ** glgb * transcription-direction: ** positive * centisome-position: ** 99.31625 * left-end-position: ** 3816361...")
 
(15 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ADENOSYLHOMOCYSTEINASE-RXN ==
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== Gene FISUC_RS15575 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/3.3.1.1 ec-3.3.1.1]
 
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* direction:
 
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** left-to-right
 
 
* common-name:
 
* common-name:
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** adenosylhomocysteinase
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** glgb
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[HOMO-CYS]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FISUC_RS06420]]
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** 99.31625   
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* left-end-position:
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** 3816361
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* right-end-position:
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** 3818577
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[GLYCOGEN-BRANCH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS08320]]
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* [[RXN-14371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s)  ==
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* [[RXN-14372]]
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* [[METHIONINE-DEG1-PWY]], L-methionine degradation I (to L-homocysteine):
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** Category: [[annotation]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II:
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* [[RXN-18777]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** Category: [[annotation]]
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== Reconstruction information  ==
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-7669]]
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== External links  ==
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** Category: [[annotation]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-7710]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21711 21711]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R00192 R00192]
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== Pathway(s) associated ==
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* UNIPROT:
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* [[GLYCOGENSYNTH-PWY]]
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** [http://www.uniprot.org/uniprot/P10760 P10760]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P10819 P10819]
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* [[PWY-622]]
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** [http://www.uniprot.org/uniprot/P23526 P23526]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P28183 P28183]
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* [[PWY-7900]]
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** [http://www.uniprot.org/uniprot/P50250 P50250]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/P60176 P60176]
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* [[PWY-5067]]
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** [http://www.uniprot.org/uniprot/Q58783 Q58783]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/O23255 O23255]
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{{#set: common-name=glgb}}
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** [http://www.uniprot.org/uniprot/O27673 O27673]
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{{#set: transcription-direction=positive}}
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** [http://www.uniprot.org/uniprot/O29376 O29376]
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{{#set: centisome-position=99.31625    }}
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** [http://www.uniprot.org/uniprot/O28279 O28279]
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{{#set: left-end-position=3816361}}
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** [http://www.uniprot.org/uniprot/P51893 P51893]
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{{#set: right-end-position=3818577}}
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** [http://www.uniprot.org/uniprot/P50245 P50245]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/P26799 P26799]
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{{#set: nb reaction associated=6}}
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** [http://www.uniprot.org/uniprot/P35007 P35007]
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{{#set: nb pathway associated=4}}
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** [http://www.uniprot.org/uniprot/P39954 P39954]
 
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** [http://www.uniprot.org/uniprot/P50252 P50252]
 
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** [http://www.uniprot.org/uniprot/P50249 P50249]
 
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** [http://www.uniprot.org/uniprot/P74008 P74008]
 
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** [http://www.uniprot.org/uniprot/P32112 P32112]
 
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** [http://www.uniprot.org/uniprot/Q9UG84 Q9UG84]
 
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** [http://www.uniprot.org/uniprot/Q01781 Q01781]
 
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** [http://www.uniprot.org/uniprot/P27604 P27604]
 
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</div>
 
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{{#set: ec-number=ec-3.3.1.1}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=adenosylhomocysteinase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS15575

  • common-name:
    • glgb
  • transcription-direction:
    • positive
  • centisome-position:
    • 99.31625
  • left-end-position:
    • 3816361
  • right-end-position:
    • 3818577

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOGENSYNTH-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-622
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5067
    • 1 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15575&oldid=93641"