Difference between revisions of "FISUC RS15575"

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(Created page with "Category:reaction == Reaction DEOXYADENYLATE-KINASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13] ** [http://enzyme.expasy.org/EC/2.7.4.11 ec-2...")
(Created page with "Category:gene == Gene FISUC_RS15575 == * common-name: ** glgb * transcription-direction: ** positive * centisome-position: ** 99.31625 * left-end-position: ** 3816361...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction DEOXYADENYLATE-KINASE-RXN ==
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== Gene FISUC_RS15575 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
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** glgb
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** [http://enzyme.expasy.org/EC/2.7.4.11 ec-2.7.4.11]
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* transcription-direction:
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* direction:
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** positive
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** left-to-right
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* centisome-position:
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== Reaction formula ==
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** 99.31625   
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* 1 [[ATP]][c] '''+''' 1 [[DAMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DADP]][c]
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* left-end-position:
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== Gene(s) associated with this reaction  ==
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** 3816361
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* Gene: [[FSU_RS15240]]
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* right-end-position:
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** Category: [[orthology]]
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** 3818577
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Organism(s) associated with this gene  ==
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[fsucgem]]
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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== Reaction(s) associated ==
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[GLYCOGEN-BRANCH-RXN]]
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== Pathway(s)  ==
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** Category: [[annotation]]
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* [[PWY-7224]], purine deoxyribonucleosides salvage:
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[RXN-14371]]
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== Reconstruction information  ==
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** Category: [[annotation]]
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
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* [[RXN-14372]]
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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** Category: [[annotation]]
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* [[RXN-18777]]
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* RHEA:
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** Category: [[annotation]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23101 23101]
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* LIGAND-RXN:
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* [[RXN-7669]]
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** [http://www.genome.jp/dbget-bin/www_bget?R01547 R01547]
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** Category: [[annotation]]
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{{#set: ec-number=ec-2.7.4.13|ec-2.7.4.11}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: direction=left-to-right}}
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* [[RXN-7710]]
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{{#set: nb gene associated=1}}
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** Category: [[annotation]]
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{{#set: nb pathway associated=1}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: reconstruction category=orthology}}
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== Pathway(s) associated ==
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{{#set: reconstruction tool=orthofinder}}
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* [[GLYCOGENSYNTH-PWY]]
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{{#set: reconstruction comment=n.a}}
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** '''4''' reactions found over '''4''' reactions in the full pathway
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{{#set: reconstruction source=ecoli|faecalibacterium|bthetaiotaomicron|bifidobacterium}}
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* [[PWY-622]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7900]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5067]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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{{#set: common-name=glgb}}
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=99.31625    }}
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{{#set: left-end-position=3816361}}
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{{#set: right-end-position=3818577}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS15575

  • common-name:
    • glgb
  • transcription-direction:
    • positive
  • centisome-position:
    • 99.31625
  • left-end-position:
    • 3816361
  • right-end-position:
    • 3818577

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOGENSYNTH-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-622
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7900
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5067
    • 1 reactions found over 4 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15575&oldid=93641"