Difference between revisions of "FISUC RS01805"

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(Created page with "Category:reaction == Reaction UDPNACETYLMURAMATEDEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98] * direction: ** left-to-right * common-n...")
(Created page with "Category:gene == Gene FISUC_RS01805 == * transcription-direction: ** negative * centisome-position: ** 10.538706 * left-end-position: ** 404964 * right-end-position: *...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction UDPNACETYLMURAMATEDEHYDROG-RXN ==
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== Gene FISUC_RS01805 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/1.3.1.98 ec-1.3.1.98]
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** negative
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* direction:
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* centisome-position:
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** left-to-right
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** 10.538706   
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* common-name:
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* left-end-position:
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** udp-n-acetylmuramate dehydrogenase
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** 404964
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== Reaction formula ==
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* right-end-position:
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* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-N-ACETYLMURAMATE]][c]
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** 406790
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS03350]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[3.2.1.8-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS01470]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[PWY-6784]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Pathway(s) ==
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* [[PWY-6717]]
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* [[PWY-7953]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis III (meso-diaminopimelate containing):
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** '''6''' reactions found over '''8''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing):
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{{#set: centisome-position=10.538706    }}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: left-end-position=404964}}
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* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing):
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{{#set: right-end-position=406790}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: organism associated=fsucgem}}
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* [[PWY0-1261]], anhydromuropeptides recycling I:
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{{#set: nb reaction associated=1}}
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** '''7''' reactions found over '''12''' reactions in the full pathway
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{{#set: nb pathway associated=2}}
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12250 12250]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
 
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** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
 
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** [http://www.uniprot.org/uniprot/P44605 P44605]
 
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** [http://www.uniprot.org/uniprot/P08373 P08373]
 
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{{#set: ec-number=ec-1.3.1.98}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=udp-n-acetylmuramate dehydrogenase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS01805

  • transcription-direction:
    • negative
  • centisome-position:
    • 10.538706
  • left-end-position:
    • 404964
  • right-end-position:
    • 406790

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6784
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6717
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS01805&oldid=93769"