Difference between revisions of "FISUC RS08240"

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(Created page with "Category:reaction == Reaction R04560 == * direction: ** reversible == Reaction formula == * 1.0 10-FORMYL-THF[c] '''+''' 1.0 AICAR[c] '''<=>''' 1.0 PHOSPHORIBOSY...")
(Created page with "Category:gene == Gene FISUC_RS08240 == * common-name: ** dxs * transcription-direction: ** positive * centisome-position: ** 52.60328 * left-end-position: ** 2021352 *...")
 
(11 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction R04560 ==
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== Gene FISUC_RS08240 ==
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* direction:
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* common-name:
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** reversible
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** dxs
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== Reaction formula ==
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* transcription-direction:
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* 1.0 [[10-FORMYL-THF]][c] '''+''' 1.0 [[AICAR]][c] '''<=>''' 1.0 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c] '''+''' 1.0 [[THF]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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== Pathway(s)  ==
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** 52.60328   
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== Reconstruction information  ==
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* left-end-position:
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* category: [[manual]]; source: [[reactions_add_kegg]]; tool: [[curation]]; comment: reaction added to reach 10-formyl-thf
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** 2021352
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== External links  ==
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* right-end-position:
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{{#set: direction=reversible}}
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** 2023220
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{{#set: nb gene associated=0}}
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== Organism(s) associated with this gene  ==
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{{#set: nb pathway associated=0}}
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* [[fsucgem]]
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{{#set: reconstruction category=manual}}
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== Reaction(s) associated ==
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{{#set: reconstruction tool=curation}}
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* [[DXS-RXN]]
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{{#set: reconstruction comment=reaction added to reach 10-formyl-thf}}
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** Category: [[annotation]]
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{{#set: reconstruction source=reactions_add_kegg}}
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s) associated ==
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* [[PYRIDOXSYN-PWY]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[NONMEVIPP-PWY]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7560]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6892]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6891]]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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{{#set: common-name=dxs}}
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{{#set: transcription-direction=positive}}
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{{#set: centisome-position=52.60328    }}
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{{#set: left-end-position=2021352}}
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{{#set: right-end-position=2023220}}
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{{#set: organism associated=fsucgem}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=5}}

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS08240

  • common-name:
    • dxs
  • transcription-direction:
    • positive
  • centisome-position:
    • 52.60328
  • left-end-position:
    • 2021352
  • right-end-position:
    • 2023220

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PYRIDOXSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS08240&oldid=93878"