Difference between revisions of "FISUC RS08240"

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(Created page with "Category:reaction == Reaction PRPPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1] * direction: ** reversible * common-name: ** ribose-phosphate...")
(Created page with "Category:gene == Gene FISUC_RS08240 == * common-name: ** dxs * transcription-direction: ** positive * centisome-position: ** 52.60328 * left-end-position: ** 2021352 *...")
 
(8 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction PRPPSYN-RXN ==
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== Gene FISUC_RS08240 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.7.6.1 ec-2.7.6.1]
 
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* direction:
 
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** reversible
 
 
* common-name:
 
* common-name:
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** ribose-phosphate pyrophosphokinase
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** dxs
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== Reaction formula ==
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* transcription-direction:
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* 1 [[ATP]][c] '''+''' 1 [[RIBOSE-5P]][c] '''<=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PRPP]][c]
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** positive
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== Gene(s) associated with this reaction  ==
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* centisome-position:
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* Gene: [[FISUC_RS06270]]
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** 52.60328   
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* left-end-position:
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** 2021352
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* right-end-position:
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** 2023220
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== Organism(s) associated with this gene  ==
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[DXS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS08165]]
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** Category: [[orthology]]
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** Category: [[annotation]]
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*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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== Pathway(s)  ==
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*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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* [[PWY0-662]], PRPP biosynthesis:
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*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Pathway(s) associated ==
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== Reconstruction information  ==
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* [[PYRIDOXSYN-PWY]]
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** '''4''' reactions found over '''7''' reactions in the full pathway
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== External links  ==
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* [[NONMEVIPP-PWY]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* RHEA:
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* [[PWY-7560]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15612 15612]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* LIGAND-RXN:
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* [[PWY-6892]]
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** [http://www.genome.jp/dbget-bin/www_bget?R01049 R01049]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* UNIPROT:
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* [[PWY-6891]]
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** [http://www.uniprot.org/uniprot/Q63468 Q63468]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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** [http://www.uniprot.org/uniprot/Q9CEI4 Q9CEI4]
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{{#set: common-name=dxs}}
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** [http://www.uniprot.org/uniprot/O67556 O67556]
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{{#set: transcription-direction=positive}}
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** [http://www.uniprot.org/uniprot/P44328 P44328]
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{{#set: centisome-position=52.60328    }}
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** [http://www.uniprot.org/uniprot/Q9PP15 Q9PP15]
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{{#set: left-end-position=2021352}}
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** [http://www.uniprot.org/uniprot/P56184 P56184]
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{{#set: right-end-position=2023220}}
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** [http://www.uniprot.org/uniprot/P65235 P65235]
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{{#set: organism associated=fsucgem}}
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** [http://www.uniprot.org/uniprot/Q9CHB8 Q9CHB8]
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{{#set: nb reaction associated=1}}
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** [http://www.uniprot.org/uniprot/P42816 P42816]
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{{#set: nb pathway associated=5}}
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** [http://www.uniprot.org/uniprot/Q59988 Q59988]
 
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** [http://www.uniprot.org/uniprot/P14193 P14193]
 
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** [http://www.uniprot.org/uniprot/P0A1V6 P0A1V6]
 
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** [http://www.uniprot.org/uniprot/P0A717 P0A717]
 
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** [http://www.uniprot.org/uniprot/P60891 P60891]
 
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** [http://www.uniprot.org/uniprot/P11908 P11908]
 
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** [http://www.uniprot.org/uniprot/P21108 P21108]
 
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** [http://www.uniprot.org/uniprot/P60892 P60892]
 
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** [http://www.uniprot.org/uniprot/P09330 P09330]
 
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** [http://www.uniprot.org/uniprot/P32895 P32895]
 
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** [http://www.uniprot.org/uniprot/Q59489 Q59489]
 
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** [http://www.uniprot.org/uniprot/P38620 P38620]
 
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** [http://www.uniprot.org/uniprot/P38063 P38063]
 
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** [http://www.uniprot.org/uniprot/P38689 P38689]
 
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** [http://www.uniprot.org/uniprot/Q42581 Q42581]
 
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** [http://www.uniprot.org/uniprot/P41831 P41831]
 
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** [http://www.uniprot.org/uniprot/P46585 P46585]
 
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** [http://www.uniprot.org/uniprot/Q42583 Q42583]
 
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** [http://www.uniprot.org/uniprot/Q14558 Q14558]
 
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** [http://www.uniprot.org/uniprot/Q55848 Q55848]
 
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** [http://www.uniprot.org/uniprot/Q49042 Q49042]
 
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** [http://www.uniprot.org/uniprot/O64888 O64888]
 
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** [http://www.uniprot.org/uniprot/Q680A5 Q680A5]
 
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** [http://www.uniprot.org/uniprot/Q93Z66 Q93Z66]
 
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</div>
 
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{{#set: ec-number=ec-2.7.6.1}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=ribose-phosphate pyrophosphokinase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:19, 17 October 2022

Gene FISUC_RS08240

  • common-name:
    • dxs
  • transcription-direction:
    • positive
  • centisome-position:
    • 52.60328
  • left-end-position:
    • 2021352
  • right-end-position:
    • 2023220

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PYRIDOXSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS08240&oldid=93878"