Difference between revisions of "FSU RS04985"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-18200 == * direction: ** reversible * common-name: ** 3-isopropylmalate dehydrogenase == Reaction formula == * 1 CPDQT-40[c] '''+'''...")
(Created page with "Category:gene == Gene FSU_RS04985 == * common-name: ** argf * transcription-direction: ** positive * centisome-position: ** 30.599762 * left-end-position: ** 1175950 *...")
 
(9 intermediate revisions by 3 users not shown)
Line 1: Line 1:
−
[[Category:reaction]]
+
[[Category:gene]]
−
== Reaction RXN-18200 ==
+
== Gene FSU_RS04985 ==
−
* direction:
 
−
** reversible
 
 
* common-name:
 
* common-name:
−
** 3-isopropylmalate dehydrogenase
+
** argf
−
== Reaction formula ==
+
* transcription-direction:
−
* 1 [[CPDQT-40]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-19487]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** positive
−
== Gene(s) associated with this reaction  ==
+
* centisome-position:
−
* Gene: [[FSU_RS15260]]
+
** 30.599762   
 +
* left-end-position:
 +
** 1175950
 +
* right-end-position:
 +
** 1176909
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[ORNCARBAMTRANSFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
* Gene: [[FISUC_RS13280]]
+
* [[RXN-13482]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
−
== Pathway(s) ==
+
== Pathway(s) associated ==
−
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle:
+
* [[PWY-4984]]
−
** '''5''' reactions found over '''30''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
== Reconstruction information  ==
+
* [[PWY-4981]]
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
== External links  ==
+
* [[ARGSYN-PWY]]
−
{{#set: direction=reversible}}
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
{{#set: common-name=3-isopropylmalate dehydrogenase}}
+
* [[PWY-7400]]
−
{{#set: nb gene associated=2}}
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: nb pathway associated=1}}
+
* [[ARGSYNBSUB-PWY]]
−
{{#set: reconstruction category=annotation}}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: reconstruction tool=pathwaytools}}
+
* [[CITRULLINE-DEG-PWY]]
−
{{#set: reconstruction comment=n.a}}
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: reconstruction source=genome}}
+
* [[CITRULBIO-PWY]]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
{{#set: common-name=argf}}
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=30.599762    }}
 +
{{#set: left-end-position=1175950}}
 +
{{#set: right-end-position=1176909}}
 +
{{#set: organism associated=fsucgem}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS04985

  • common-name:
    • argf
  • transcription-direction:
    • positive
  • centisome-position:
    • 30.599762
  • left-end-position:
    • 1175950
  • right-end-position:
    • 1176909

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4981
    • 5 reactions found over 6 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • CITRULLINE-DEG-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04985&oldid=94063"