Difference between revisions of "FISUC RS15310"

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(Created page with "Category:reaction == Reaction 2.8.1.6-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6] * direction: ** left-to-right * common-name: ** biotin syntha...")
(Created page with "Category:gene == Gene FISUC_RS15310 == * transcription-direction: ** positive * centisome-position: ** 97.68547 * left-end-position: ** 3753696 * right-end-position: *...")
 
(13 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction 2.8.1.6-RXN ==
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== Gene FISUC_RS15310 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.8.1.6 ec-2.8.1.6]
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** positive
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* direction:
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* centisome-position:
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** left-to-right
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** 97.68547   
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* common-name:
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* left-end-position:
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** biotin synthase biob
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** 3753696
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== Reaction formula ==
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* right-end-position:
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* 1 [[DETHIOBIOTIN]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''=>''' 1 [[BIOTIN]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[MET]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c]
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** 3754967
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS04990]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[GLUTSEMIALDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS02690]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[CITRULBIO-PWY]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Gene: [[FISUC_RS00810]]
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* [[ARGININE-SYN4-PWY]]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PWY-6922]]
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* Gene: [[FISUC_RS03100]]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** Category: [[annotation]]
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* [[PWY-3341]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Pathway(s) ==
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* [[PROSYN-PWY]]
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''2''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I:
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{{#set: centisome-position=97.68547    }}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: left-end-position=3753696}}
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== Reconstruction information  ==
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{{#set: right-end-position=3754967}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: organism associated=fsucgem}}
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== External links  ==
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{{#set: nb reaction associated=1}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: nb pathway associated=5}}
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22061 22061]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
 
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** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
 
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** [http://www.uniprot.org/uniprot/P53557 P53557]
 
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** [http://www.uniprot.org/uniprot/O67104 O67104]
 
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** [http://www.uniprot.org/uniprot/P44987 P44987]
 
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** [http://www.uniprot.org/uniprot/Q58692 Q58692]
 
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** [http://www.uniprot.org/uniprot/P0A506 P0A506]
 
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** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
 
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** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
 
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** [http://www.uniprot.org/uniprot/P46396 P46396]
 
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** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 
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** [http://www.uniprot.org/uniprot/P19206 P19206]
 
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** [http://www.uniprot.org/uniprot/P32451 P32451]
 
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** [http://www.uniprot.org/uniprot/P54967 P54967]
 
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** [http://www.uniprot.org/uniprot/P46715 P46715]
 
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** [http://www.uniprot.org/uniprot/P73538 P73538]
 
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** [http://www.uniprot.org/uniprot/P12996 P12996]
 
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** [http://www.uniprot.org/uniprot/O59778 O59778]
 
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</div>
 
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{{#set: ec-number=ec-2.8.1.6}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=biotin synthase biob}}
 
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{{#set: nb gene associated=4}}
 
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{{#set: nb pathway associated=2}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:20, 17 October 2022

Gene FISUC_RS15310

  • transcription-direction:
    • positive
  • centisome-position:
    • 97.68547
  • left-end-position:
    • 3753696
  • right-end-position:
    • 3754967

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway
  • ARGININE-SYN4-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3341
    • 5 reactions found over 5 reactions in the full pathway
  • PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15310&oldid=94316"