Difference between revisions of "FISUC RS15310"

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(Created page with "Category:reaction == Reaction AICARSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2] * direction: ** reversible * common-name: ** adenylosuccinat...")
(Created page with "Category:gene == Gene FISUC_RS15310 == * transcription-direction: ** positive * centisome-position: ** 97.68547 * left-end-position: ** 3753696 * right-end-position: *...")
 
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction AICARSYN-RXN ==
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== Gene FISUC_RS15310 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/4.3.2.2 ec-4.3.2.2]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 97.68547   
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* common-name:
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* left-end-position:
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** adenylosuccinate lyase
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** 3753696
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== Reaction formula ==
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* right-end-position:
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* 1 [[P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE]][c] '''<=>''' 1 [[AICAR]][c] '''+''' 1 [[FUM]][c]
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** 3754967
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS00540]]
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* [[fsucgem]]
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== Reaction(s) associated ==
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* [[GLUTSEMIALDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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== Pathway(s) associated ==
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* [[CITRULBIO-PWY]]
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* Gene: [[FISUC_RS14350]]
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* [[ARGININE-SYN4-PWY]]
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** Category: [[annotation]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[PWY-6922]]
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== Pathway(s)  ==
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III:
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* [[PWY-3341]]
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
 
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[PROSYN-PWY]]
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
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{{#set: transcription-direction=positive}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: centisome-position=97.68547    }}
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== External links  ==
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{{#set: left-end-position=3753696}}
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* RHEA:
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{{#set: right-end-position=3754967}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23923 23923]
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{{#set: organism associated=fsucgem}}
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* LIGAND-RXN:
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{{#set: nb reaction associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04559 R04559]
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{{#set: nb pathway associated=5}}
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P21265 P21265]
 
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** [http://www.uniprot.org/uniprot/Q58339 Q58339]
 
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** [http://www.uniprot.org/uniprot/Q9CF40 Q9CF40]
 
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** [http://www.uniprot.org/uniprot/Q9PJ88 Q9PJ88]
 
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** [http://www.uniprot.org/uniprot/Q9JSP3 Q9JSP3]
 
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** [http://www.uniprot.org/uniprot/P0AB89 P0AB89]
 
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** [http://www.uniprot.org/uniprot/O65180 O65180]
 
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** [http://www.uniprot.org/uniprot/P12047 P12047]
 
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{{#set: ec-number=ec-4.3.2.2}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=adenylosuccinate lyase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=plantarum|genome|faecalibacterium}}
 

Latest revision as of 11:20, 17 October 2022

Gene FISUC_RS15310

  • transcription-direction:
    • positive
  • centisome-position:
    • 97.68547
  • left-end-position:
    • 3753696
  • right-end-position:
    • 3754967

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CITRULBIO-PWY
    • 8 reactions found over 8 reactions in the full pathway
  • ARGININE-SYN4-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3341
    • 5 reactions found over 5 reactions in the full pathway
  • PROSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15310&oldid=94316"