Difference between revisions of "FSU RS14600"

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(Created page with "Category:reaction == Reaction ORNCARBAMTRANSFER-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.1.3.3 ec-2.1.3.3] * direction: ** reversible * common-name: ** ornith...")
(Created page with "Category:gene == Gene FSU_RS14600 == * transcription-direction: ** positive * centisome-position: ** 92.407555 * left-end-position: ** 3551226 * right-end-position: **...")
 
(10 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ORNCARBAMTRANSFER-RXN ==
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== Gene FSU_RS14600 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/2.1.3.3 ec-2.1.3.3]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 92.407555   
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* common-name:
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* left-end-position:
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** ornithine carbamoyltransferase
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** 3551226
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== Reaction formula ==
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* right-end-position:
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* 1 [[CARBAMOYL-P]][c] '''+''' 1 [[L-ORNITHINE]][c] '''<=>''' 1 [[L-CITRULLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** 3552038
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== Gene(s) associated with this reaction  ==
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== Organism(s) associated with this gene  ==
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* Gene: [[FSU_RS04985]]
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* [[fsucgem]]
 +
== Reaction(s) associated ==
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* [[THYMIDYLATESYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FISUC_RS03095]]
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== Pathway(s) associated ==
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** Category: [[annotation]]
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* [[1CMET2-PWY]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Pathway(s)  ==
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* [[PWY0-166]]
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* [[PWY-4984]], urea cycle:
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** '''11''' reactions found over '''13''' reactions in the full pathway
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7187]]
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* [[PWY-4981]], L-proline biosynthesis II (from arginine):
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** '''7''' reactions found over '''7''' reactions in the full pathway
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7210]]
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* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
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** '''6''' reactions found over '''8''' reactions in the full pathway
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** '''5''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7199]]
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* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
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** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3841]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7184]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
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* [[PWY-7198]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[CITRULLINE-DEG-PWY]], L-citrulline degradation:
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{{#set: transcription-direction=positive}}
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: centisome-position=92.407555    }}
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis:
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{{#set: left-end-position=3551226}}
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** '''8''' reactions found over '''8''' reactions in the full pathway
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{{#set: right-end-position=3552038}}
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== Reconstruction information  ==
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{{#set: organism associated=fsucgem}}
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb reaction associated=1}}
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== External links  ==
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{{#set: nb pathway associated=8}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19516 19516]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R01398 R01398]
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/Q58291 Q58291]
 
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** [http://www.uniprot.org/uniprot/Q9CHD1 Q9CHD1]
 
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** [http://www.uniprot.org/uniprot/Q7M182 Q7M182]
 
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** [http://www.uniprot.org/uniprot/Q9JTI4 Q9JTI4]
 
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** [http://www.uniprot.org/uniprot/P11727 P11727]
 
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** [http://www.uniprot.org/uniprot/Q9CEY4 Q9CEY4]
 
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** [http://www.uniprot.org/uniprot/Q9CE14 Q9CE14]
 
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** [http://www.uniprot.org/uniprot/Q9PNU6 Q9PNU6]
 
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** [http://www.uniprot.org/uniprot/P44770 P44770]
 
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** [http://www.uniprot.org/uniprot/Q9YHY9 Q9YHY9]
 
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** [http://www.uniprot.org/uniprot/P11066 P11066]
 
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** [http://www.uniprot.org/uniprot/P11803 P11803]
 
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** [http://www.uniprot.org/uniprot/P18186 P18186]
 
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** [http://www.uniprot.org/uniprot/P05150 P05150]
 
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** [http://www.uniprot.org/uniprot/P14995 P14995]
 
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** [http://www.uniprot.org/uniprot/P06960 P06960]
 
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** [http://www.uniprot.org/uniprot/P04391 P04391]
 
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** [http://www.uniprot.org/uniprot/P00480 P00480]
 
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** [http://www.uniprot.org/uniprot/P11725 P11725]
 
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** [http://www.uniprot.org/uniprot/P21302 P21302]
 
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** [http://www.uniprot.org/uniprot/P11724 P11724]
 
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** [http://www.uniprot.org/uniprot/P08308 P08308]
 
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** [http://www.uniprot.org/uniprot/P68747 P68747]
 
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** [http://www.uniprot.org/uniprot/P00481 P00481]
 
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** [http://www.uniprot.org/uniprot/P31317 P31317]
 
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** [http://www.uniprot.org/uniprot/Q01322 Q01322]
 
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** [http://www.uniprot.org/uniprot/Q01323 Q01323]
 
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** [http://www.uniprot.org/uniprot/Q01324 Q01324]
 
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** [http://www.uniprot.org/uniprot/Q01326 Q01326]
 
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** [http://www.uniprot.org/uniprot/Q01325 Q01325]
 
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** [http://www.uniprot.org/uniprot/Q9JYI3 Q9JYI3]
 
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** [http://www.uniprot.org/uniprot/Q01327 Q01327]
 
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** [http://www.uniprot.org/uniprot/P0A5M9 P0A5M9]
 
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** [http://www.uniprot.org/uniprot/Q02047 Q02047]
 
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** [http://www.uniprot.org/uniprot/Q9TRC9 Q9TRC9]
 
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** [http://www.uniprot.org/uniprot/Q48296 Q48296]
 
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** [http://www.uniprot.org/uniprot/P75473 P75473]
 
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** [http://www.uniprot.org/uniprot/Q49080 Q49080]
 
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** [http://www.uniprot.org/uniprot/Q43814 Q43814]
 
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** [http://www.uniprot.org/uniprot/O53089 O53089]
 
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** [http://www.uniprot.org/uniprot/O50039 O50039]
 
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</div>
 
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{{#set: ec-number=ec-2.1.3.3}}
 
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{{#set: direction=reversible}}
 
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{{#set: common-name=ornithine carbamoyltransferase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=7}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Latest revision as of 11:20, 17 October 2022

Gene FSU_RS14600

  • transcription-direction:
    • positive
  • centisome-position:
    • 92.407555
  • left-end-position:
    • 3551226
  • right-end-position:
    • 3552038

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • 1CMET2-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY0-166
    • 11 reactions found over 13 reactions in the full pathway
  • PWY-7187
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7210
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-7199
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-3841
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-7184
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7198
    • 5 reactions found over 7 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS14600&oldid=94333"