Difference between revisions of "FISUC RS07620"

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(Created page with "Category:reaction == Reaction RXN-20081 == * direction: ** left-to-right * common-name: ** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata ** asp-trna(asn)/glu-t...")
(Created page with "Category:gene == Gene FISUC_RS07620 == * common-name: ** lpxa * transcription-direction: ** positive * centisome-position: ** 48.362724 * left-end-position: ** 1858403...")
 
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[[Category:reaction]]
+
[[Category:gene]]
== Reaction RXN-20081 ==
+
== Gene FISUC_RS07620 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata
+
** lpxa
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc
+
* transcription-direction:
** asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb
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** positive
== Reaction formula ==
+
* centisome-position:
* 1 [[4-Phosphooxy-L-aspartyl-tRNAAsn]][c] '''+''' 1 [[AMMONIUM]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
** 48.362724   
== Gene(s) associated with this reaction  ==
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* left-end-position:
* Gene: [[FSU_RS14325]]
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** 1858403
 +
* right-end-position:
 +
** 1859170
 +
== Organism(s) associated with this gene  ==
 +
* [[fsucgem]]
 +
== Reaction(s) associated ==
 +
* [[UDPNACETYLGLUCOSAMACYLTRANS-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
* Gene: [[FISUC_RS14410]]
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== Pathway(s) associated ==
** Category: [[annotation]]
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* [[NAGLIPASYN-PWY]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** '''6''' reactions found over '''6''' reactions in the full pathway
* Gene: [[FISUC_RS12775]]
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{{#set: common-name=lpxa}}
** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
{{#set: centisome-position=48.362724    }}
* Gene: [[FISUC_RS12355]]
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{{#set: left-end-position=1858403}}
** Category: [[annotation]]
+
{{#set: right-end-position=1859170}}
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
{{#set: organism associated=fsucgem}}
* Gene: [[FSU_RS00600]]
+
{{#set: nb reaction associated=1}}
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FSU_RS14750]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s) ==
 
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent):
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc|asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata}}
 
{{#set: nb gene associated=6}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 

Latest revision as of 11:21, 17 October 2022

Gene FISUC_RS07620

  • common-name:
    • lpxa
  • transcription-direction:
    • positive
  • centisome-position:
    • 48.362724
  • left-end-position:
    • 1858403
  • right-end-position:
    • 1859170

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated